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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540768
Gene symbol: Nphp1
Gene name: nephronophthisis 1 (juvenile) homolog (human)
Probe: RIKEN clone I420025P16 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:9457: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: nephric duct, metanephric portion Ambiguous GUDMAP:9457 signal may be background staining
TS17: genitourinary system mesenchyme Ambiguous GUDMAP:9457 uncertain
TS17: mesonephros Ambiguous GUDMAP:9457 possible signal in the mesenchyme and tubules
TS17: mesonephros mesenchyme Ambiguous GUDMAP:9457 possible signal
TS17: mesonephric tubule Ambiguous GUDMAP:9457 possible signal
TS17: genitourinary system Ambiguous GUDMAP:9457
TS17: nephric duct, mesonephric portion Ambiguous GUDMAP:9457
TS17: metanephric mesenchyme Ambiguous GUDMAP:9457
TS17: nephric duct Ambiguous GUDMAP:9457
Specimen GUDMAP:9458: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: male reproductive system Present Regionally restricted GUDMAP:9458
TS21: mesonephros of male Present Regionally restricted GUDMAP:9458
TS21: mesonephric tubule of male Present GUDMAP:9458
TS21: mesonephric mesenchyme of male Present GUDMAP:9458 signal seen surrounding paramesonephric duct mesonephric portion and possibly weakly elsewhere
TS21: testis Present Regionally restricted GUDMAP:9458
TS21: primary sex cord Present GUDMAP:9458
TS21: coelomic epithelium of testis Ambiguous GUDMAP:9458 signal seen may be background staining
TS21: interstitium of the testis Ambiguous GUDMAP:9458 signal seen may be background staining
TS21: developing vasculature of testis Ambiguous GUDMAP:9458 signal seen may be background staining
TS21: coelomic epithelium of male mesonephros Ambiguous GUDMAP:9458 signal seen may be background staining
TS21: nephric duct of male, rest of Ambiguous GUDMAP:9458
TS21: epithelium of nephric duct of male Ambiguous GUDMAP:9458 possible weak signal
TS21: mesenchyme of nephric duct of male Ambiguous GUDMAP:9458 signal seen may be background staining
TS21: mesenchyme of rest of paramesonephric duct of male Ambiguous GUDMAP:9458 signal seen may be background staining
TS21: nephric duct of male, mesonephric portion Ambiguous GUDMAP:9458
TS21: paramesonephric duct of male, mesonephric portion Ambiguous GUDMAP:9458
TS21: paramesonephric duct of male, rest of Ambiguous GUDMAP:9458
TS21: epithelium of rest of paramesonephric duct of male Ambiguous GUDMAP:9458
Specimen GUDMAP:9459: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the metanephros is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Present GUDMAP:9459
TS21: metanephros Present GUDMAP:9459 there may be ubiquitous expression although some structures appear to have stronger expression than others; these structures are not identifiable
TS21: ureter Ambiguous GUDMAP:9459 possible weak expression
Specimen GUDMAP:9460: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: urinary system Present GUDMAP:9460
TS21: urogenital sinus Present GUDMAP:9460
TS21: primitive bladder Present GUDMAP:9460
Specimen GUDMAP:9461: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: female reproductive system Present Regionally restricted GUDMAP:9461
TS21: mesonephros of female Present Regionally restricted GUDMAP:9461
TS21: nephric duct of female, mesonephric portion Present GUDMAP:9461
TS21: paramesonephric duct of female, mesonephric portion Present GUDMAP:9461
TS21: nephric duct of female, rest of Present GUDMAP:9461
TS21: epithelium of nephric duct of female Present GUDMAP:9461
TS21: paramesonephric duct of female, rest of Present GUDMAP:9461
TS21: epithelium of rest of paramesonephric duct of female Present GUDMAP:9461
TS21: ovary Present Regionally restricted GUDMAP:9461
TS21: mesenchymal stroma of ovary Present GUDMAP:9461
TS21: mesonephric mesenchyme of female Ambiguous GUDMAP:9461 signal is likely to be background staining
TS21: mesonephric tubule of female Ambiguous GUDMAP:9461
TS21: coelomic epithelium of female mesonephros Ambiguous GUDMAP:9461 signal is likely to be background staining
TS21: mesenchyme of nephric duct of female Ambiguous GUDMAP:9461 signal is likely to be background staining
TS21: mesenchyme of rest of paramesonephric duct of female Ambiguous GUDMAP:9461 signal is likely to be background staining
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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