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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540760
Gene symbol: Slc27a2
Gene name: solute carrier family 27 (fatty acid transporter), member 2
Probe: RIKEN clone F530214H19 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:9179: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present Regionally restricted GUDMAP:9179
TS23: metanephros Present Regionally restricted GUDMAP:9179
TS23: renal cortex Present Regionally restricted GUDMAP:9179
TS23: cortical renal tubule Present Regionally restricted GUDMAP:9179 graded expression; strong expression in subset of tubules of maturing nephrons only including early proximal
TS23: cortical early proximal tubule Present Regionally restricted GUDMAP:9179 graded expression; strong expression restricted to early proximal of maturing nephrons only. Very weak expression detected in segment 1 of early proximal tubule
TS23: maturing nephron Present Regionally restricted GUDMAP:9179 graded expression
TS23: late tubule Present Regionally restricted GUDMAP:9179 graded expression
TS23: renal capsule Absent GUDMAP:9179
TS23: nephrogenic zone Absent GUDMAP:9179
TS23: nephrogenic interstitium Absent GUDMAP:9179
TS23: cap mesenchyme Absent GUDMAP:9179
TS23: pretubular aggregate Absent GUDMAP:9179
TS23: ureteric tip Absent GUDMAP:9179
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:9179
TS23: renal vesicle Absent GUDMAP:9179
TS23: comma-shaped body Absent GUDMAP:9179
TS23: upper limb of comma-shaped body Absent GUDMAP:9179
TS23: lower limb of comma-shaped body Absent GUDMAP:9179
TS23: s-shaped body Absent GUDMAP:9179
TS23: renal connecting tubule of s-shaped body Absent GUDMAP:9179
TS23: distal segment of s-shaped body Absent GUDMAP:9179
TS23: medial segment of s-shaped body Absent GUDMAP:9179
TS23: proximal segment of s-shaped body Absent GUDMAP:9179
TS23: visceral epithelium of s-shaped body Absent GUDMAP:9179
TS23: parietal epithelium of s-shaped body Absent GUDMAP:9179
TS23: capillary loop renal corpuscle Absent GUDMAP:9179
TS23: visceral epithelium of capillary loop renal corpuscle Absent GUDMAP:9179
TS23: parietal epithelium of capillary loop renal corpuscle Absent GUDMAP:9179
TS23: presumptive mesangium of capillary loop renal corpuscle Absent GUDMAP:9179
TS23: presumptive endothelium of capillary loop renal corpuscle Absent GUDMAP:9179
TS23: associated interstitium of capillary loop renal corpuscle Absent GUDMAP:9179
TS23: maturing renal corpuscle Absent GUDMAP:9179
TS23: maturing glomerular tuft Absent GUDMAP:9179
TS23: glomerular capillary system of maturing glomerular tuft Absent GUDMAP:9179
TS23: glomerular basement membrane of maturing renal corpuscle Absent GUDMAP:9179
TS23: glomerular mesangium of maturing glomerular tuft Absent GUDMAP:9179
TS23: visceral epithelium of maturing renal corpuscle Absent GUDMAP:9179
TS23: Bowman's capsule of maturing renal corpuscle Absent GUDMAP:9179
TS23: parietal epithelium of maturing renal corpuscle Absent GUDMAP:9179
TS23: glomerular mesangium of maturing renal corpuscle Absent GUDMAP:9179
TS23: juxtaglomerular arteriole Absent GUDMAP:9179
TS23: anlage of loop of Henle of cortical renal tubule Absent GUDMAP:9179
TS23: cortical collecting duct Absent GUDMAP:9179
TS23: renal cortical interstitium Absent GUDMAP:9179
TS23: renal cortical vasculature Absent GUDMAP:9179
TS23: renal cortical arterial system Absent GUDMAP:9179
TS23: renal cortical venous system Absent GUDMAP:9179
TS23: renal cortical capillary Absent GUDMAP:9179
TS23: renal connecting tubule Absent GUDMAP:9179
TS23: renal medulla Absent GUDMAP:9179
TS23: immature loop of Henle Absent GUDMAP:9179
TS23: straight limb of immature loop of Henle Absent GUDMAP:9179
TS23: bend of immature loop of Henle Absent GUDMAP:9179
TS23: renal medullary interstitium Absent GUDMAP:9179
TS23: renal medullary vasculature Absent GUDMAP:9179
TS23: renal medullary arterial system Absent GUDMAP:9179
TS23: renal medullary venous system Absent GUDMAP:9179
TS23: renal medullary capillary Absent GUDMAP:9179
TS23: medullary collecting duct Absent GUDMAP:9179
TS23: renal calyx Absent GUDMAP:9179
TS23: renal pelvis Absent GUDMAP:9179
TS23: pelvic urothelial lining Absent GUDMAP:9179
TS23: pelvic smooth muscle Absent GUDMAP:9179
TS23: perihilar interstitium Absent GUDMAP:9179
TS23: developing capillary loop stage nephron group Absent GUDMAP:9179
TS23: collecting duct Absent GUDMAP:9179
TS23: renal interstitium Absent GUDMAP:9179
TS23: renal vasculature Absent GUDMAP:9179
TS23: early nephron Absent GUDMAP:9179
TS23: cortical early distal tubule Ambiguous GUDMAP:9179 uncertain due to inability to identify tubule subtype but likely to be absent
TS23: cortical renal tubule of maturing nephron group Present Regionally restricted GUDMAP:9179 graded expression
TS23: early proximal tubule of maturing nephron Present Regionally restricted GUDMAP:9179 graded expression; Graded expression strength with strong expression in a subset of early proximal and very weak expression detected in segment 1 of early proximal tubule adjacent to renal corpuscle.
TS23: cortical renal tubule of capillary loop nephron group Absent GUDMAP:9179
TS23: early proximal tubule of capillary loop nephron Absent GUDMAP:9179
TS23: early distal tubule of capillary loop nephron Absent GUDMAP:9179
TS23: renal connecting tubule of capillary loop nephron Absent GUDMAP:9179
TS23: renal connecting tubule of maturing nephron Absent GUDMAP:9179
TS23: early distal tubule of maturing nephron Ambiguous GUDMAP:9179 uncertain due to inability to identify tubule subtype but likely to be absent
Specimen GUDMAP:9182: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: urinary system Present Regionally restricted GUDMAP:9182
TS28: metanephros Present Regionally restricted GUDMAP:9182
TS28: renal cortex Present Regionally restricted GUDMAP:9182
TS28: cortical renal tubule Present Regionally restricted GUDMAP:9182 regional expression in subset of proximal convoluted tubules and proximal straight tubules
TS28: renal proximal tubule Present Regionally restricted GUDMAP:9182 regional expression in subset of proximal convoluted tubules and proximal straight tubules
TS28: renal proximal convoluted tubule Present Regionally restricted GUDMAP:9182 strong regional expression in subset of proximal convoluted tubules that includes segment 2 and does not include the first portion of segment 1
TS28: segment 2 of proximal tubule Present GUDMAP:9182
TS28: proximal straight tubule, cortical portion Present GUDMAP:9182
TS28: renal medulla Present Regionally restricted GUDMAP:9182
TS28: outer renal medulla Present Regionally restricted GUDMAP:9182
TS28: outer stripe of outer medulla Present Regionally restricted GUDMAP:9182
TS28: loop of Henle, outer medullary portion Present Regionally restricted GUDMAP:9182
TS28: proximal straight tubule, outer medullary portion Present GUDMAP:9182 strong expression
TS28: mature renal corpuscle Absent GUDMAP:9182
TS28: glomerular tuft Absent GUDMAP:9182
TS28: glomerular capillary system Absent GUDMAP:9182
TS28: glomerular mesangium of glomerular tuft Absent GUDMAP:9182
TS28: glomerular basement membrane of mature renal corpuscle Absent GUDMAP:9182
TS28: visceral epithelium of mature renal corpuscle Absent GUDMAP:9182
TS28: Bowman's capsule of mature renal corpuscle Absent GUDMAP:9182
TS28: parietal epithelium of mature renal corpuscle Absent GUDMAP:9182
TS28: urinary space of mature renal corpuscle Absent GUDMAP:9182
TS28: afferent arteriole of mature renal corpuscle Absent GUDMAP:9182
TS28: part of afferent arteriole forming the juxtaglomerular complex Absent GUDMAP:9182
TS28: rest of afferent arteriole Absent GUDMAP:9182
TS28: efferent arteriole of mature renal corpuscle Absent GUDMAP:9182
TS28: extraglomerular mesangium Absent GUDMAP:9182
TS28: renal distal tubule Absent GUDMAP:9182
TS28: distal straight tubule of renal cortex Absent GUDMAP:9182
TS28: macula densa Absent GUDMAP:9182
TS28: postmacula segment of distal straight tubule Absent GUDMAP:9182
TS28: premacula segment of distal straight tubule of renal cortex Absent GUDMAP:9182
TS28: distal convoluted tubule Absent GUDMAP:9182
TS28: renal connecting tubule Absent GUDMAP:9182
TS28: cortical collecting duct Absent GUDMAP:9182
TS28: renal cortical interstitium Absent GUDMAP:9182
TS28: renal cortical fibroblasts Absent GUDMAP:9182
TS28: peritubular fibroblasts of cortex Absent GUDMAP:9182
TS28: periarterial fibroblasts of cortex Absent GUDMAP:9182
TS28: resident macrophage of the cortex Absent GUDMAP:9182
TS28: rest of renal cortical interstitium Absent GUDMAP:9182
TS28: renal cortical lymphatics Absent GUDMAP:9182
TS28: renal cortical nerves Absent GUDMAP:9182
TS28: renal cortical vasculature Absent GUDMAP:9182
TS28: renal cortical arterial system Absent GUDMAP:9182
TS28: interlobular artery Absent GUDMAP:9182
TS28: arcuate artery Absent GUDMAP:9182
TS28: renal cortical venous system Absent GUDMAP:9182
TS28: interlobular vein Absent GUDMAP:9182
TS28: arcuate vein Absent GUDMAP:9182
TS28: renal cortical capillary Absent GUDMAP:9182
TS28: distal straight tubule of outer stripe of outer medulla Absent GUDMAP:9182
TS28: inner stripe of outer medulla Absent GUDMAP:9182
TS28: loop of Henle of inner stripe of outer medulla Absent GUDMAP:9182
TS28: thin descending limb of inner stripe of outer medulla Absent GUDMAP:9182
TS28: premacula segment of distal straight tubule of inner stripe of inner medulla Absent GUDMAP:9182
TS28: outer medullary collecting duct Absent GUDMAP:9182
TS28: outer medullary interstitium Absent GUDMAP:9182
TS28: outer medullary fibroblast Absent GUDMAP:9182
TS28: peritubular fibroblasts of outer medulla Absent GUDMAP:9182
TS28: periarterial fibroblasts of outer medulla Absent GUDMAP:9182
TS28: resident macrophage of the outer medulla Absent GUDMAP:9182
TS28: rest of outer medullary interstitium Absent GUDMAP:9182
TS28: inner renal medulla Absent GUDMAP:9182
TS28: loop of Henle, inner medullary portion Absent GUDMAP:9182
TS28: thin descending limb of inner medulla Absent GUDMAP:9182
TS28: bend of loop of Henle inner medullary portion Absent GUDMAP:9182
TS28: thin ascending limb of inner medulla Absent GUDMAP:9182
TS28: inner medullary collecting duct Absent GUDMAP:9182
TS28: inner medullary interstitium Absent GUDMAP:9182
TS28: inner medullary fibroblast Absent GUDMAP:9182
TS28: peritubular fibroblasts of inner medulla Absent GUDMAP:9182
TS28: periarterial fibroblasts of inner medulla Absent GUDMAP:9182
TS28: resident macrophage of the inner medulla Absent GUDMAP:9182
TS28: renal medullary lymphatics Absent GUDMAP:9182
TS28: renal medullary nerves Absent GUDMAP:9182
TS28: renal medullary vasculature Absent GUDMAP:9182
TS28: renal medullary arterial system Absent GUDMAP:9182
TS28: renal medullary venous system Absent GUDMAP:9182
TS28: renal medullary capillary Absent GUDMAP:9182
TS28: renal pelvis Absent GUDMAP:9182
TS28: pelvic urothelial lining Absent GUDMAP:9182
TS28: pelvic smooth muscle Absent GUDMAP:9182
TS28: perihilar interstitium Absent GUDMAP:9182
TS28: perihilar fibroblast Absent GUDMAP:9182
TS28: resident macrophage of the perihilar interstitium Absent GUDMAP:9182
TS28: rest of perihilar interstitium Absent GUDMAP:9182
TS28: segment 1 of proximal tubule Ambiguous GUDMAP:9182 expression absent from the first portion of segment 1 with possible expression in the remainder of segment 1
Specimen GUDMAP:9441: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP. Given the time of exposure to color development compared with the control probe, any staining seen is likely to be background only.
Structure Level Pattern Image Note
TS17: genitourinary system Ambiguous GUDMAP:9441 given the time of exposure to color development compared with the control probe any staining seen is likely to be background only.
Specimen GUDMAP:9442: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: male reproductive system Present Regionally restricted GUDMAP:9442
TS21: mesonephros of male Present Regionally restricted GUDMAP:9442
TS21: mesonephric tubule of male Present GUDMAP:9442
TS21: cranial mesonephric tubule of male Present GUDMAP:9442
TS21: rest of cranial mesonephric tubule of male Present GUDMAP:9442
TS21: caudal mesonephric tubule of male Present GUDMAP:9442
TS21: paramesonephric duct of male, mesonephric portion Present GUDMAP:9442
TS21: paramesonephric duct of male, rest of Present GUDMAP:9442
TS21: epithelium of rest of paramesonephric duct of male Present GUDMAP:9442
TS21: testis Present Regionally restricted GUDMAP:9442
TS21: primary sex cord Present GUDMAP:9442
TS21: urogenital sinus Present GUDMAP:9442
TS21: mesonephric mesenchyme of male Absent GUDMAP:9442
TS21: coelomic epithelium of male mesonephros Absent GUDMAP:9442
TS21: mesenchyme of nephric duct of male Absent GUDMAP:9442
TS21: mesenchyme of rest of paramesonephric duct of male Absent GUDMAP:9442
TS21: nephric duct of male, rest of Absent GUDMAP:9442
TS21: epithelium of nephric duct of male Absent GUDMAP:9442
TS21: coelomic epithelium of testis Absent GUDMAP:9442
TS21: interstitium of the testis Absent GUDMAP:9442
TS21: developing vasculature of testis Absent GUDMAP:9442
TS21: coelomic vessel Absent GUDMAP:9442
TS21: interstitial vessel Absent GUDMAP:9442
TS21: nephric duct of male, mesonephric portion Ambiguous Regionally restricted GUDMAP:9442 rostral, graded expression; weak signal only detected in the caudal duct where the cranial mesonephric tubules are located and in the caudal duct expression was not detected
Specimen GUDMAP:9443: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: female reproductive system Present Regionally restricted GUDMAP:9443
TS21: mesonephros of female Present Regionally restricted GUDMAP:9443
TS21: mesonephric tubule of female Present GUDMAP:9443
TS21: cranial mesonephric tubule of female Present GUDMAP:9443
TS21: rest of cranial mesonephric tubule of female Present GUDMAP:9443
TS21: caudal mesonephric tubule of female Present GUDMAP:9443
TS21: paramesonephric duct of female, mesonephric portion Present GUDMAP:9443
TS21: paramesonephric duct of female, rest of Present GUDMAP:9443
TS21: epithelium of rest of paramesonephric duct of female Present GUDMAP:9443
TS21: ovary Present Regionally restricted GUDMAP:9443
TS21: mesenchymal stroma of ovary Present GUDMAP:9443
TS21: urogenital sinus Present GUDMAP:9443
TS21: mesonephric mesenchyme of female Absent GUDMAP:9443
TS21: nephric duct of female, mesonephric portion Absent GUDMAP:9443
TS21: coelomic epithelium of female mesonephros Absent GUDMAP:9443
TS21: nephric duct of female, rest of Absent GUDMAP:9443
TS21: epithelium of nephric duct of female Absent GUDMAP:9443
TS21: mesenchyme of nephric duct of female Absent GUDMAP:9443
TS21: mesenchyme of rest of paramesonephric duct of female Absent GUDMAP:9443
Specimen GUDMAP:9444: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: urogenital mesentery Absent GUDMAP:9444
TS21: metanephros Absent GUDMAP:9444
TS21: ureter Absent GUDMAP:9444
Specimen GUDMAP:9445: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:9445
TS21: urogenital sinus Present Regionally restricted GUDMAP:9445
TS21: primitive bladder Absent GUDMAP:9445
TS21: ureter Absent GUDMAP:9445
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05/07/2024
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