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Gene Expression Data
Assay Details
Assay
Reference: J:105069 Kim FA, et al., The vHNF1 homeodomain protein establishes early rhombomere identity by direct regulation of Kreisler expression. Mech Dev. 2005 Dec;122(12):1300-9
Assay type: RNA in situ
MGI Accession ID: MGI:5520086
Gene symbol: Hoxb1
Gene name: homeobox B1
Probe: probe 1
Probe preparation: Antisense RNA
Results
Specimen 3B: embryonic day 8.5 (more )
Note: 8 somites
Structure Level Pattern Image Note
TS13: rhombomere 4 Present 3B
Specimen 3C: embryonic day 8.0 (more )
Note: 4-6 somites. Also stained for Hnf1b (assay MGI:5520063).
Structure Level Pattern Image Note
TS12: future hindbrain Present Regionally restricted 3C Expression is posterior to the rhombomere 3/4 boundary.
TS12: future spinal cord Present 3C
Specimen 3D: embryonic day 9.0 (more )
Note: 12-14 somites. Also stained for Hnf1b (assay MGI:5520063).
Structure Level Pattern Image Note
TS14: future hindbrain Present Regionally restricted 3D There is a gap in expression between the Hoxb1 expressing rhombomere 4 domain and the HNF1 (Hnf1b) expression domain.
TS14: rhombomere 4 Present 3D
Specimen 3E: embryonic day 8.0 (more )
Note: 4-6 somites. Also stained for Hnf1b (assay MGI:5520063).
Structure Level Pattern Image Note
TS12: future hindbrain Present Regionally restricted 3E Expression is posterior to the rhombomere 3/4 boundary.
TS12: future spinal cord Present 3E
Specimen 3F: embryonic day 8.0 (more )
Note: 4-6 somites. Also stained for Hnf1b (assay MGI:5520063).
Structure Level Pattern Image Note
TS12: future hindbrain Present Regionally restricted 3F Expression is posterior to the rhombomere 3/4 boundary.
TS12: future spinal cord Present 3F
Specimen 3G: embryonic day 8.5 (more )
Note: 8-10 somites. Also stained for Hnf1b (assay MGI:5520063).
Structure Level Pattern Image Note
TS13: future hindbrain Present Regionally restricted 3G Expression is posterior to the rhombomere 3/4 boundary.
TS13: future spinal cord Present 3G
Specimen 3H: embryonic day 8.5 (more )
Note: 8-10 somites. Also stained for Hnf1b (assay MGI:5520063).
Structure Level Pattern Image Note
TS13: future hindbrain Present Regionally restricted 3H Expression is posterior to the rhombomere 3/4 boundary.
TS13: future spinal cord Present 3H
Specimen 3I: embryonic day 9.0 (more )
Note: 12-14 somites. Also stained for Hnf1b (assay MGI:5520063).
Structure Level Pattern Image Note
TS14: future hindbrain Present Regionally restricted 3I There is a gap in expression between the Hoxb1 expressing rhombomere 4 domain and the HNF1 (Hnf1b) expression domain.
TS14: rhombomere 4 Present 3I
Specimen 3J: embryonic day 9.0 (more )
Note: 12-14 somites. Also stained for Hnf1b (assay MGI:5520063).
Structure Level Pattern Image Note
TS14: future hindbrain Present Regionally restricted 3J There is a gap in expression between the Hoxb1 expressing rhombomere 4 domain and the HNF1 (Hnf1b) expression domain.
TS14: rhombomere 4 Present Regionally restricted 3J
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
MGI 6.23 		The Jackson Laboratory