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Gene Expression Data
Assay Details
Assay
Reference: J:38926 Ng LJ, et al., SOX9 binds DNA, activates transcription, and coexpresses with type II collagen during chondrogenesis in the mouse. Dev Biol. 1997 Mar 1;183(1):108-21
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5496602
Gene symbol: Sox9
Gene name: SRY (sex determining region Y)-box 9
Antibody: anti-Sox9
Detection system: Biotinylated secondary antibody/[Strept]avidin coupled to horseradish peroxidase
Results
Specimen 4A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: notochord Present 4A
TS17: sclerotome Present 4A
TS17: future spinal cord Present Regionally restricted 4A Expression was detected in the ventricular neuroepithelial layer of the spinal cord.

Specimen 4B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: notochord Present 4B
TS21: vertebral pre-cartilage condensation Present 4B
TS21: dorsal root ganglion Absent 4B
TS21: laryngeal cartilage Present Regionally restricted 4B Expression was in the mesenchymal condensations of the laryngeal cartilages.

Specimen 4C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: vertebral pre-cartilage condensation Present Regionally restricted 4C Expression was detected in the vertebral bodies undergoing chondrocytic differentiation, but not yet hypertrophy.

Specimen 4D: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: hindlimb skeleton Strong Regionally restricted 4D Expression was strong in the proliferating chondrocytes of a hindlimb bone.

Specimen 4E: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: hindlimb skeleton Present Regionally restricted 4E Expression was strong in proliferating chondrocytes, but is downregulated in hypertrophic chondrocytes.

Specimen 4F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: otocyst epithelium Present 4F

Specimen 4G: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: endocardial cushion Present Regionally restricted 4G Expression was detected in the endocardial cushions flanking the atrioventricular canal.
TS17: cardiac muscle tissue Absent 4G Expression was absent from epimyocardium.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
01/20/2026
MGI 6.24
The Jackson Laboratory