Gene Expression Data
Assay Details
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Assay
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Reference:
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J:4303
Deschamps J, et al., Two phases in the establishment of HOX expression domains. Dev Biol. 1993 Apr;156(2):473-80
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5491054
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Gene symbol:
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Hoxb8
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Gene name:
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homeobox B8
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Probe:
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Hox 2.4 probe4
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Probe preparation:
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Antisense labelled with S35 RNA
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Results
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Specimen
2A/B:
embryonic day 7.5
(more )
Note: Early head fold.
Specimen
2A/B:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Note:
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Early head fold.
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Specimen
2C/D:
embryonic day 7.5
(more )
Note: More advanced head fold.
Specimen
2C/D:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Note:
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More advanced head fold.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: allantois |
Present |
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2C/D
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| TS11: primitive streak |
Present |
Regionally restricted |
2C/D
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Expression was detected within and along the posterior part of the primitive streak in ectoderm and mesoderm. The rostral boundary of expression was more posterior in the mesoderm than in the ectoderm.
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Specimen
2E/F:
embryonic day 8.0
(more )
Note: 4 somite embryo.
Specimen
2E/F:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Note:
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4 somite embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: neural ectoderm |
Present |
Regionally restricted |
2E/F
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The rostral limit of expression is in neurectoderm located more anteriorly than the node.
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Specimen
2G/H:
embryonic day 8.5
(more )
Note: 9 somite embryo.
Specimen
2G/H:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 8.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Note:
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9 somite embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: neural ectoderm |
Present |
Regionally restricted |
2G/H
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The rostral expression boundary in the neurectoderm was at the level of the 6th somite.
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| TS13: trunk unsegmented mesenchyme |
Present |
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2G/H
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The rostral boundary of expression in the presomitic mesoderm was at a more posterior position than the 6th somite.
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Specimen
2I/J:
embryonic day 9.25
(more )
Specimen
2I/J:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 9.25
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
2K/L:
embryonic day 9.25
(more )
Specimen
2K/L:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 9.25
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: future hindbrain |
Present |
Regionally restricted |
2K/L
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The rostral boundary of expression in the neurectoderm was in the posterior hindbrain/upper spinal cord.
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| TS15: future spinal cord |
Present |
Regionally restricted |
2K/L
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The rostral boundary of expression in the neurectoderm was in the posterior hindbrain/upper spinal cord.
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Specimen
2M/N:
embryonic day 12.5
(more )
Specimen
2M/N:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: hindbrain |
Present |
Regionally restricted |
2M/N
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The rostral boundary of expression in the neurectoderm was in the posterior hindbrain/upper spinal cord at the level of the 6th somite.
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| TS20: spinal cord |
Present |
Regionally restricted |
2M/N
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The rostral boundary of expression in the neurectoderm was in the posterior hindbrain/upper spinal cord at the level of the 6th somite.
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| TS20: embryo mesenchyme |
Present |
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2M/N
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Specimen
2O/P:
embryonic day 12.5
(more )
Specimen
2O/P:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
not shown:
embryonic day 12.5
(more )
Specimen
not shown:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Specimen
3A/B:
embryonic day 7.5
(more )
Note: Early head fold. 3A-H were from adjacent sections.
Specimen
3A/B:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Note:
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Early head fold. 3A-H were from adjacent sections.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: primitive streak |
Strong |
Regionally restricted |
3A/B
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Expression was detected in both ectoderm and mesoderm.
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Specimen
3C/D:
embryonic day 7.5
(more )
Note: Early head fold. 3A-H were from adjacent sections.
Specimen
3C/D:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Note:
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Early head fold. 3A-H were from adjacent sections.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: primitive streak |
Strong |
Regionally restricted |
3C/D
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Expression was equally strong in the mesoderm and ectoderm in the posterior part of the streak.
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Specimen
3E/F:
embryonic day 7.5
(more )
Note: Early head fold. 3A-H were from adjacent sections.
Specimen
3E/F:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Note:
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Early head fold. 3A-H were from adjacent sections.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: primitive streak |
Strong |
Regionally restricted |
3E/F
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The rostral extermity of the expression domain in the ectoderm was more anterior than in the mesoderm. Expression decreased in the mesoderm of more anterior sections.
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Specimen
3G/H:
embryonic day 7.5
(more )
Note: Early head fold. 3A-H were from adjacent sections.
Specimen
3G/H:
(close )
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Genetic Background:
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involves: C57BL/6J * CBA
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Note:
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Early head fold. 3A-H were from adjacent sections.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: primitive streak |
Strong |
Regionally restricted |
3G/H
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Expression remains strong in the streak, but in more anterior sections, the level in mesoderm becomes undetectable at the level of the most rostral positive ectoderm.
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