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Gene Expression Data
Assay Details
Assay
Reference: J:9829 Bogarad LD, et al., The developmental expression pattern of a new murine homeo box gene: Hox-2.5. Dev Biol. 1989 Jun;133(2):537-49
Assay type: RNA in situ
MGI Accession ID: MGI:5486207
Gene symbol: Hoxb9
Gene name: homeobox B9
Probe: A
Probe preparation: Antisense labelled with S35 RNA
Results
Specimen not shown: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo Absent
TS11: extraembryonic component Absent

Specimen 4a,a': embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural tube Present Regionally restricted 4a/a' The anterior boundary of expression is at the level of the third cervical somite.
TS13: lateral plate mesoderm Present Regionally restricted 4a/a' The anterior boundary of expression is at the level of the fifth cervical somite.
TS13: somite Present Regionally restricted 4a/a' The anterior boundary of expression is at the level of the fifth cervical somite.

Specimen 4b,b': embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural tube Present 4b/b' Expression is throughout the dorsoventral axis of the neural tube.
TS13: lateral plate mesoderm Present 4b/b'
TS13: somite Present 4b/b'
TS13: embryo endoderm Absent 4b/b'
TS13: future hindbrain Absent 4b/b'
TS13: notochord Absent 4b/b'

Specimen 4c,c': embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural tube Present Regionally restricted 4c/c' Expression is in the posterior neural tube.
TS13: embryo mesenchyme Present Regionally restricted 4c/c' Expression is in posterior mesoderm.
TS13: somite Present Regionally restricted 4c/c' Absent in anterior somites.
TS13: future brain Absent 4c/c'

Specimen 4e,e': embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Regionally restricted 4e/e' The anterior boundary of expression is at the level of the third cervical somite.

Specimen 4f,f': embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present 4f/f' Expression is throughout the dorsoventral axis of the neural tube.
TS15: spinal ganglion Present Regionally restricted 4f/f' Expression is in the spinal ganglia posterior to the third cervical somite.
TS15: embryo mesenchyme Present Regionally restricted 4f/f' Expression is posterior to the fifth cervical somite.

Specimen not shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: mesonephros mesenchyme Present Regionally restricted Expression is in the mesonephric mesenchyme surrounding the hindgut.
TS15: mesonephric tubule Absent

Specimen 5a,a': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: future spinal cord Present Regionally restricted 5a/a' The anterior boundary of expression is at the level of the first cervical somite.
TS17: spinal ganglion Present Regionally restricted 5a/a' The anterior boundary of expression is at the level of the first cervical somite.
TS17: trunk mesenchyme Absent 5a/a'

Specimen 5b.b': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: spinal ganglion Present Regionally restricted 5b/b' The anterior boundary of expression is at the level of the first cervical somite.
TS17: future spinal cord Present Graded 5b/b' Decreasing intensity along the anteroposterior axis.

Specimen 5c,c': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube lateral wall Present Regionally restricted 5c/c' Expression is dorsal and is absent in differentiating motor neurons.

Specimen 6a,a': embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube ventricular layer Present Regionally restricted 6a/a' In the anterior spinal cord the stongly labeled cells are along the outer edge of the ventricular zone. The anterior boundary is at the first cervical somite. In the posterior spinal cord labeling is strongest dorsolaterally.
TS19: spinal ganglion Weak 6a/a'
TS19: neural tube basal columns Absent 6a/a'

Specimen 6b,b': embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: alar columns Present 6b/b' Expression is in the dorsal horn.

Specimen 6e,e': postnatal newborn (more )
Structure Level Pattern Image Note
TS27: spinal cord dorsal horn Present Scattered 6e/e' The anterior boundary is at the first cervical somite.

Specimen 7a,a': embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Regionally restricted 7a/a' Expression is throughout the dorsoventral axis of the neural tube.

Specimen 7b,b': embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube lateral wall Present Regionally restricted 7b/b' Expression is dorsal and is absent in differentiating motor neurons.

Specimen 7c,c': embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube ventricular layer Present Regionally restricted 7c/c' In the anterior spinal cord the stongly labeled cells are along the outer edge of the ventricular zone.

Specimen 7d,d': embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: alar columns Present Regionally restricted 7d/d' Expression is in the dorsal horn.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory