Gene Expression Data
Assay Details
Assay
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Reference:
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J:28311
Neubuser A, et al., Characterization and developmental expression of Pax9, a paired-box-containing gene related to Pax1. Dev Biol. 1995 Aug;170(2):701-16
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5463489
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Gene symbol:
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Pax9
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Gene name:
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paired box 9
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Probe:
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Pax9 probe1
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
5B:
embryonic day 9.5
(more )
Specimen
5B:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
5D:
embryonic day 9.5
(more )
Specimen
5D:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
5F:
embryonic day 10.5
(more )
Specimen
5F:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
6B:
embryonic day 11.5
(more )
Specimen
6B:
(close )
Genetic Background:
|
either: C57BL/6 or MF1 or NMRI
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Age:
|
embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS19: axial skeleton |
Strong |
Regionally restricted |
6B
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Expression is in the mesenchymal condensations between the spinal nerves of two adjacent segments and further laterally. Expression in the medial condensation is weaker.
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Specimen
6E:
embryonic day 12.5
(more )
Specimen
6E:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS20: axial skeleton |
Present |
Regionally restricted |
6E
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Expression is in the anlagen of the intervertebral discs and around the anlagen of the vertebral bodies. Strong expression is lateral to the vertebral arteries and weak medially.
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Specimen
6H:
embryonic day 12.5
(more )
Specimen
6H:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
|
embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS20: vertebral cartilage condensation |
Present |
Regionally restricted |
6H
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Expression extends dorsolaterally into the condensations for the neural arch and ventrolaterally into the mesenchyme that is lateral to the rib primordia.
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Specimen
6K:
embryonic day 12.5
(more )
Specimen
6K:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
9B:
embryonic day 13.5
(more )
Specimen
9B:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS21: knee mesenchyme |
Present |
Regionally restricted |
9B
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Expression is in the mesenchyme between the tibia and femur primordia.
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Specimen
9E:
embryonic day 14.5
(more )
Specimen
9E:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS22: foot |
Present |
Regionally restricted |
9E
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Expression is anterior of the talus and naviculare primordia, between the cuneiformes and the proximal part of the metatarsals.
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Specimen
10A/B:
(close )
Genetic Background:
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involves: C57BL/6 * CC57BR/MvY
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Mutant Allele(s):
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Pax1Un-s/Pax1Un-s
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS19: trunk |
Present |
Regionally restricted |
10A/B
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Expression is around and lateral to the vertebral arteries and weakly medially around the notochord and is the same as in wil-type.
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Specimen
10C/D:
(close )
Genetic Background:
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involves: C57BL/6 * CC57BR/MvY
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Mutant Allele(s):
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Pax1un/Pax1Un-s
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: trunk |
Present |
Regionally restricted |
10C/D
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Expression is between the spinal nerves and extends laterally while expression medially around the notochord is weaker.
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Specimen
Not shown E14.5:
embryonic day 14.5
(more )
Specimen
Not shown E14.5:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
|
embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
Not shown E16.5:
embryonic day 16.5
(more )
Specimen
Not shown E16.5:
(close )
Genetic Background:
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either: C57BL/6 or MF1 or NMRI
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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