About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:164032 Mayer M, et al., Expression of two type II cadherins, Cdh12 and Cdh22 in the developing and adult mouse brain. Gene Expr Patterns. 2010 October - December;10(7-8):351-360
Assay type: RNA in situ
MGI Accession ID: MGI:5461472
Gene symbol: Cdh22
Gene name: cadherin 22
Probe: Cdh22 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3B: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: diencephalon Present Regionally restricted 3B Expression is in the subventricular zone.

Specimen 3D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: epithalamus Present Regionally restricted 3D Expression is in the medial habenula.

Specimen 3F: embryonic day 19.0 (more )
Structure Level Pattern Image Note
TS26: thalamus Strong Regionally restricted 3F Expression is in the ventromedial thalamic nuclei.

Specimen 3H: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: thalamic nucleus Weak Regionally restricted 3H Expression is in dorsolateral and ventromedial thalamic nuclei.
TS27: medial habenular nucleus Strong Regionally restricted 3H

Specimen 3J: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: epithalamus Present Regionally restricted 3J Expression is medial.

Specimen 3L: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: amygdala Present 3L Expression is in the forming thalamic nuclei.

Specimen 3N: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: epithalamus Strong Regionally restricted 3N Expression is in the dorsal and medial habenula.

Specimen 3P: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: telencephalon Present Regionally restricted 3P Expresion is in the subventricular zone.
TS24: telencephalon ventricular layer Present 3P
TS24: thalamus Weak Regionally restricted 3P Expression is in the ventromedial thalamic nuclei.

Specimen 3R: embryonic day 19.0 (more )
Structure Level Pattern Image Note
TS26: thalamus Strong Regionally restricted 3R Expression is in the ventromedial thalamic nuclei.
TS26: epithalamus Present Regionally restricted 3R Expression is in the ventral habenular nuclei.

Specimen 3T: embryonic day 19.0 (more )
Structure Level Pattern Image Note
TS26: hypothalamus Present Regionally restricted 3T Expression is in the paraventricular, anterior and periventricular nuclei, absent in the lateral hypothalamic nuclei.

Specimen 3V: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: medial habenular nucleus Strong 3V
TS27: thalamus Present Regionally restricted 3V Dorsolateral thalamus.
TS27: thalamic nucleus Weak Regionally restricted 3V Expression is in dorsolateral and ventromedial thalamic nuclei.

Specimen 3Y: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: basolateral amygdaloid nucleus Strong 3Y
TS27: dorsomedial hypothalamic nucleus Strong 3Y
TS27: central amygdaloid nucleus Strong 3Y
TS27: paraventricular hypothalamic nucleus Weak 3Y

Specimen 4B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: thalamus Present Regionally restricted 4B

Specimen 4D: postnatal adult (more )
Structure Level Pattern Image Note
TS28: thalamus Present Regionally restricted 4D Expression is in the centrolateral nucleus and in the ventromedial part of the thalamus including the rhomboid, reuniens and ventromedial nuclei.

Specimen 4F: postnatal adult (more )
Structure Level Pattern Image Note
TS28: thalamus Present Regionally restricted 4F Expression is in the centrolateral nucleus and in the ventromedial part of the thalamus including the rhomboid, reuniens and ventromedial nuclei.
TS28: medial habenular nucleus Present 4F

Specimen 4I: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hypothalamus Present Regionally restricted 4I Expression is in the dorsomedial and lateral part of the ventromedial hypothalamus.
TS28: hypothalamic nucleus Present 4I

Specimen 4J: postnatal adult (more )
Structure Level Pattern Image Note
TS28: amygdala Present Ubiquitous 4J

Specimen 4M: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 4M
TS28: cerebellum granule cell layer Present 4M
TS28: cerebellum molecular layer Present 4M

Specimen 4N: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dorsal cochlear nucleus Present Scattered 4N
TS28: deep cerebellar nucleus Present Regionally restricted 4N Expression is in scattered cells of the dentate nucleus.
TS28: trigeminal nucleus Present 4N

Specimen Not shown: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: hippocampus Absent

Specimen 5D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hippocampus Weak Regionally restricted 5D Expression is in the future pyramidal cells of the CA1-CA3 regions.

Specimen 5E: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: hippocampus stratum radiatum Present 5E
TS27: hippocampus region Present Regionally restricted 5E Expression is in pyramidal cells.
TS27: dentate gyrus granule cell layer Absent 5E

Specimen 5F: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus CA3 Strong Regionally restricted 5F Expression is in pyramidal cells.
TS28: CA1 pyramidal cell layer Strong
TS28: dentate gyrus granule cell layer Strong

Specimen 5J: postnatal adult (more )
Structure Level Pattern Image Note
TS28: CA1 pyramidal cell layer Strong 5J
TS28: dentate gyrus granule cell layer Strong 5J
TS28: hippocampus CA3 Strong Regionally restricted 5J Expression is in pyramidal cells.

Specimen 5K: postnatal adult (more )
Structure Level Pattern Image Note
TS28: hippocampus region Present Regionally restricted 5K Expression is in pyramidal cells.

Specimen 5L: postnatal adult (more )
Structure Level Pattern Image Note
TS28: CA1 pyramidal cell layer Strong 5L
TS28: dentate gyrus granule cell layer Strong 5L
TS28: hippocampus CA3 Strong Regionally restricted 5L Expression is in pyramidal cells.

Specimen 6E: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: neocortex Absent 6E

Specimen 6F: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cortical layer II Strong Ubiquitous 6F
TS27: cortical layer III Strong Ubiquitous 6F
TS27: cortical layer IV Strong Ubiquitous 6F
TS27: cortical layer V Strong Ubiquitous 6F

Specimen 6G: postnatal day 3 (more )
Structure Level Pattern Image Note
TS27: cortical layer II Weak 6G
TS27: cortical layer III Weak 6G
TS27: cortical layer VI Weak 6G

Specimen 6H: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cortical layer III Weak Regionally restricted 6H
TS28: cortical layer V Weak Regionally restricted 6H

Specimen 6Q: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: cortical layer II Strong 6Q
TS28: cortical layer III Strong 6Q

Specimen 6S: postnatal day 7 (more )
Note: Double labeled: orange - Cdh22; purple - Cux2 (assay MGI:5461532).
Structure Level Pattern Image Note
TS28: cortical layer II Present Regionally restricted 6S Expression is retsricted to a row of cells within layer II closest to the pial surface.

Specimen 6T: postnatal day 7 (more )
Note: Double labeled: orange - Cdh22; purple - Cux2 (assay MGI:5461532).
Structure Level Pattern Image Note
TS28: cortical layer II Present Regionally restricted 6T Expression is retsricted to a row of cells within layer II closest to the pial surface.
TS28: cortical layer III Present Regionally restricted 6T Expression is in a thin row of cells in layer III positioned towards the ventricular surface.

Specimen 6V: postnatal day 7 (more )
Note: Double labeled: orange - Cdh22; purple - Bcl11b (Ctip2; assay MGI:5461533).
Structure Level Pattern Image Note
TS28: cortical layer V Present Single cells 6V

Specimen 6W: postnatal day 7 (more )
Note: Double labeled: orange - Cdh22; purple - Bcl11b (Ctip2; assay MGI:5461533).
Structure Level Pattern Image Note
TS28: cortical layer V Present 6W


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
04/23/2024
MGI 6.23
The Jackson Laboratory