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Gene Expression Data
Assay Details
Assay
Reference: J:71426 MacLean G, et al., Cloning of a novel retinoic-acid metabolizing cytochrome P450, Cyp26B1, and comparative expression analysis with Cyp26A1 during early murine development. Mech Dev. 2001 Sep;107(1-2):195-201
Assay type: RNA in situ
MGI Accession ID: MGI:5445902
Gene symbol: Cyp26b1
Gene name: cytochrome P450, family 26, subfamily b, polypeptide 1
Probe: Cyp26b1 cDNA2
Probe preparation: Antisense RNA
Results
Specimen 3B: embryonic day 7.0-7.5 (more )
Structure Level Pattern Image Note
TS10: embryo Absent 3B
TS10: extraembryonic component Absent 3B

Specimen 3D: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS13: rhombomere 3 Present 3D
TS13: rhombomere 5 Present 3D Higher level expression in pre-rhombomere 5.

Specimen 3F: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS14: rhombomere 3 Present 3F
TS14: rhombomere 5 Present 3F
TS14: rhombomere 6 Present 3F
TS14: branchial arch Present Regionally restricted 3F Expressed in the caudal pharyngeal arch region.
TS14: trunk Present Regionally restricted 3F , 3F inset Expressed in the intersomitic regions.
TS14: tail bud Absent 3F

Specimen 5B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS16: forelimb bud Present 5B
TS16: hindlimb bud Present 5B
TS16: rhombomere 2 Present 5B
TS16: rhombomere 3 Present 5B
TS16: rhombomere 4 Present 5B
TS16: rhombomere 5 Present 5B
TS16: rhombomere 6 Present 5B
TS16: tail mesenchyme Present Regionally restricted 5B Weak expression in tail bud mesoderm. No expression in the growing tail tip.

Specimen 5D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS16: rhombomere 2 Present Non-Uniform 5D
TS16: rhombomere 4 Present Non-Uniform 5D
TS16: rhombomere 5 Present 5D Highest level expression.
TS16: rhombomere 6 Present 5D Highest level expression.
TS16: rhombomere 3 Present 5D Weaker expression.

Specimen 5F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS16: branchial arch ectoderm Present 5F Expressed in defined areas of the caudal branchial arches.
TS16: branchial arch endoderm Present 5F Expressed in defined areas of the caudal branchial arches.
TS16: 1st branchial arch maxillary-mandibular groove Absent 5F No expression at the maxillo-mandibular cleft.

Specimen 5F inset: embryonic day 9.5 (more )
Note: Using JB-4 embedding kit.
Structure Level Pattern Image Note
TS16: 2nd branchial arch ectoderm Present 5F inset
TS16: 2nd branchial arch endoderm Present 5F inset

Specimen 5H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS18: forelimb bud Present 5H
TS18: hindlimb bud Present 5H
TS18: hindbrain Present 5H
TS18: tail mesenchyme Weak Regionally restricted 5H Weak expression in tail bud mesoderm. No expression in the growing tail tip.

Specimen 6A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS16: rhombomere 5 Present Widespread 6A Expressed throughout the rhombomere.
TS16: rhombomere 6 Present Widespread 6A Expressed throughout the rhombomere.
TS16: rhombomere 2 lateral wall Present Regionally restricted 6A Expressed in the ventral portion.
TS16: rhombomere 3 lateral wall Present Regionally restricted 6A Expressed in the ventral portion.
TS16: rhombomere 4 lateral wall Present Regionally restricted 6A Expressed in the ventral portion. Three longitudinal columns are labeled.
TS16: rhombomere 2 floor plate Absent 6A
TS16: rhombomere 3 floor plate Absent 6A
TS16: rhombomere 4 floor plate Absent 6A

Specimen 6B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS18: rhombomere 4 Present Regionally restricted 6B Expressed as longitudinal columns.
TS18: rhombomere 5 Present Regionally restricted 6B Expressed as longitudinal columns.
TS18: rhombomere 6 Present Regionally restricted 6B Expressed as longitudinal columns.
TS18: rhombomere 2 Present 6B
TS18: rhombomere 3 Present 6B

Specimen 7A: embryonic day 9.0-9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud Present Regionally restricted 7A Expressed along the ventral aspect of the bud.
TS15: trunk Present Regionally restricted 7A Expressed in the intersomitic regions.

Specimen 7B: embryonic day 9.0-9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud Present Regionally restricted 7B Distally restricted expression at the ventral part.

Specimen 7C: embryonic day 9.0-9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud Present Non-Uniform 7C Expressed in both dorsal and ventral locations, and no or very little transcripts in the central, prospective apical ectodermal ridge territory.
TS15: forelimb bud presumptive apical ectodermal ridge Absent 7C

Specimen 7D: embryonic day 9.0-9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud Present Regionally restricted 7D Distally restricted.

Specimen 7E: embryonic day 9.0-9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud Present Non-Uniform 7E Expressed in both dorsal and ventral locations, and no or very little transcripts in the central, prospective apical ectodermal ridge territory.
TS15: forelimb bud presumptive apical ectodermal ridge Absent 7E

Specimen 7F: embryonic day 9.0 (more )
Note: Using JB-4 embedding kit.
Structure Level Pattern Image Note
TS15: forelimb bud ectoderm Present 7F
TS15: forelimb bud mesenchyme Present Regionally restricted 7F Expressed in the superficial mesenchyme.

Specimen 7G: embryonic day 10.5 (more )
Note: Using JB-4 embedding kit.
Structure Level Pattern Image Note
TS18: forelimb bud ectoderm Present 7G
TS18: forelimb bud mesenchyme Present Regionally restricted 7G Expressed throughout the distal mesenchyme or progress zone. Highest expression is along the dorsal and ventral regions.

Specimen 8B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: 2nd branchial arch Present 8B
TS19: mandibular process Present 8B
TS19: maxillary process Present 8B
TS19: midbrain-hindbrain junction Present 8B
TS19: myelencephalon Present 8B
TS19: nasal process Present 8B
TS19: footplate Strong Regionally restricted 8B Expressed along the distal margin.
TS19: handplate Strong Regionally restricted 8B Expressed along the distal margin.

Specimen 8D: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: handplate Strong Regionally restricted 8D Expressed along the distal margin.
TS19: apical ectodermal ridge Absent 8D

Specimen 8F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: handplate Strong Regionally restricted 8F Expressed along the distal margin.
TS19: apical ectodermal ridge Absent 8F

Specimen not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural retinal epithelium Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory