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Gene Expression Data
Assay Details
Assay
Reference: J:2048 Frohman MA, et al., Isolation and analysis of embryonic expression of Hox-4.9, a member of the murine labial-like gene family. Mech Dev. 1992 Jul;38(1):55-67
Assay type: RNA in situ
MGI Accession ID: MGI:5441306
Gene symbol: Hoxd1
Gene name: homeobox D1
Probe: Probe 1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen not shown: embryonic day 7.5-7.75 (more )
Structure Level Pattern Image Note
TS11: extraembryonic mesoderm Weak

Specimen 4B/C: embryonic day 7.75 (more )
Structure Level Pattern Image Note
TS11: primitive streak Weak Regionally restricted 4B/C Expression was detected at low levels in the posterior part of the primitive streak.

Specimen not shown: embryonic day 6.75-7.25 (more )
Structure Level Pattern Image Note
TS10: conceptus Absent

Specimen not shown: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: extraembryonic mesenchyme Present Regionally restricted Expression was detected in the extraembryonic mesoderm at the base of the allantois.

Specimen 5B: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: lateral plate mesoderm Present Regionally restricted 5B Expression was detected from the posterior end to the approximate level of the hindbrain/spinal cord.

Specimen 5C/D: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: lateral plate mesoderm Present 5C/D
TS13: embryo endoderm Absent 5C/D
TS13: paraxial mesenchyme Absent 5C/D
TS13: neural ectoderm Absent 5C/D Expression was not detected in the neural tube.

Specimen 5E/F: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: lateral plate mesoderm Present 5E/F
TS13: future hindbrain Absent 5E/F
TS13: future prosencephalon Absent 5E/F
TS13: intermediate mesenchyme Absent 5E/F
TS13: paraxial mesenchyme Absent 5E/F

Specimen 5G/H: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: lateral plate mesoderm Present 5G/H
TS13: intermediate mesenchyme Absent 5G/H
TS13: paraxial mesenchyme Absent 5G/H
TS13: notochord Absent 5G/H Expression was not detected in notochordal mesoderm.

Specimen 6A/B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: tail mesenchyme Present 6A/B
TS19: embryo mesenchyme Present Regionally restricted 6A/B Expression is not observed in lateral mesoderm anterior of the tail bud. Transcripts are found in loose mesenchymal cells between the dermatome and the external covering of superficial ectoderm.

Specimen 6D/E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: trunk mesenchyme Present Regionally restricted 6D/E Expression is not observed in lateral mesoderm. Transcripts are found in loose mesenchymal cells between the dermatome and the external covering of superficial ectoderm.
TS17: limb Absent 6D/E
TS17: neural tube Absent 6D/E

Specimen 6G/H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: trunk mesenchyme Present Regionally restricted 6G/H Expression is not observed in lateral mesoderm. Transcripts are found in loose mesenchymal cells between the dermatome and the external covering of superficial ectoderm.
TS17: dermatome Present Regionally restricted 6G/H Expression was detected in medial dermatome and the adjacent neural crest cells.
TS17: mesenchyme derived from neural crest Present Regionally restricted 6G/H Expression was detected in medial dermatome and the adjacent neural crest cells.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory