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Gene Expression Data
Assay Details
Assay
Reference: J:39659 Platt KA, et al., Expression of the mouse Gli and Ptc genes is adjacent to embryonic sources of hedgehog signals suggesting a conservation of pathways between flies and mice. Mech Dev. 1997 Mar;62(2):121-35
Assay type: RNA in situ
MGI Accession ID: MGI:5441035
Gene symbol: Shh
Gene name: sonic hedgehog
Probe: Shh cDNA2
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1C: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural ectoderm Present Regionally restricted 1C Expression was confined to the ventral midline of the neural tube.
TS13: hindgut diverticulum Present 1C

Specimen 1F: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future midbrain Present Regionally restricted 1F Expression was detected in the ventral midline.

Specimen 1I: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: central nervous system Present Regionally restricted 1I Expression was detected along the neural tube.
TS15: 1st branchial arch mandibular component Present 1I

Specimen 1L: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 1st branchial arch endoderm Present 1L
TS17: brain Present 1L
TS17: floor plate Present 1L
TS17: limb Present 1L

Specimen 2C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud mesenchyme Weak Regionally restricted 2C Expression was detected in the posterior half of the forelimb bud.

Specimen 2F: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: forelimb bud mesenchyme Present Regionally restricted 2F Expression was detected in the posterior half of the forelimb bud.

Specimen 2I: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: hindlimb bud mesenchyme Present Regionally restricted 2I Expression in the posterior half of the hindlimb bud has expanded.

Specimen 4C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: hindbrain Present Regionally restricted 4C Expression was detected along the ventral midline of the hindbrain and midbrain.
TS20: midbrain Present Regionally restricted 4C Expression was detected along the ventral midline of the hindbrain and midbrain.
TS20: thalamus Present Regionally restricted 4C Expression was detected in the zona limitans.
TS20: hypothalamus Present 4C
TS20: mandibular process Present 4C
TS20: medial ganglionic eminence Present Regionally restricted 4C Expression was detected in the medial face of the medial ganglionic eminence.

Specimen 4K: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Regionally restricted 4K Expression was detected in the midline.
TS19: hindbrain Present Regionally restricted 4K Expression was detected in the midline.
TS19: midbrain Present Regionally restricted 4K Expression was detected in the midline.

Specimen 5C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: gut Present Regionally restricted 5C Expression was detected in the endoderm.

Specimen 5F: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: vibrissa follicle Present Regionally restricted 5F Expression was detected in the central ectodermal cells.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory