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Gene Expression Data
Assay Details
Assay
Reference: J:111163 Duffy SL, et al., Expression analysis of the Epha1 receptor tyrosine kinase and its high-affinity ligands Efna1 and Efna3 during early mouse development. Gene Expr Patterns. 2006 Oct;6(7):719-23
Assay type: RNA in situ
MGI Accession ID: MGI:5430658
Gene symbol: Efna3
Gene name: ephrin A3
Probe: Efna3 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1C: embryonic day 5.5 (more )
Structure Level Pattern Image Note
TS8: epiblast Present 1C

Specimen 1F: embryonic day 5.5 (more )
Structure Level Pattern Image Note
TS8: epiblast Present 1F

Specimen 1H: embryonic day 6.25 (more )
Structure Level Pattern Image Note
TS8: extraembryonic ectoderm Present Regionally restricted 1H Expression is in the distal third of the extraembryonic ectoderm.
TS8: epiblast Present 1H

Specimen 2C: embryonic day 7.0 (more )
Note: Mid- to late streak stage.
Structure Level Pattern Image Note
TS10: extraembryonic ectoderm Present 2C
TS10: embryo ectoderm Present Regionally restricted 2C Expression is in the anterior region.
TS10: embryo endoderm Present Regionally restricted 2C Expression is in the anterior region.
TS10: embryo mesoderm Present Regionally restricted 2C Expression is in the anterior region.

Specimen 2F: embryonic day 7.5 (more )
Note: Late streak to early bud stage.
Structure Level Pattern Image Note
TS11: extraembryonic ectoderm Present 2F
TS11: embryo Present Regionally restricted 2F Expression is in the germ layer tissues of the anterior region.

Specimen 2I: embryonic day 7.5 (more )
Note: Late bud stage.
Structure Level Pattern Image Note
TS11: chorion Present 2I

Specimen 2L: embryonic day 7.5 (more )
Note: Late bud stage.
Structure Level Pattern Image Note
TS11: chorion Present 2L

Specimen 3C: embryonic day 7.5 (more )
Note: Early headfold stage.
Structure Level Pattern Image Note
TS11: embryo mesoderm Present Regionally restricted 3C Expression is in the caudal mesoderm.
TS11: embryo mesenchyme Present Regionally restricted 3C Expression is in presomitic mesoderm.
TS11: chorion Present 3C
TS11: future spinal cord neural plate Present 3C
TS11: future brain neural fold Present Regionally restricted 3C Expression is in the hindbrain.

Specimen 3F: embryonic day 8.0 (more )
Note: Early somite stage.
Structure Level Pattern Image Note
TS12: embryo mesenchyme Present Regionally restricted 3F Expression is in the caudal mesoderm.
TS12: chorion Present 3F
TS12: future spinal cord neural plate Present 3F
TS12: trunk unsegmented mesenchyme Present 3F
TS12: future hindbrain Present 3F Expression is in the neural folds of the hindbrain.

Specimen 3I: embryonic day 8.0 (more )
Note: Early somite stage.
Structure Level Pattern Image Note
TS12: embryo mesenchyme Present Regionally restricted 3I Expression is in the caudal mesoderm.
TS12: chorion Present 3I
TS12: future spinal cord neural plate Present 3I
TS12: trunk unsegmented mesenchyme Present 3I
TS12: future hindbrain Present Regionally restricted 3I Expression is in the neural folds of the hindbrain.

Specimen 3L: embryonic day 8.5 (more )
Note: 8-9 somites.
Structure Level Pattern Image Note
TS13: embryo mesenchyme Present Regionally restricted 3L Expression is in the caudal mesoderm.
TS13: chorion Present 3L
TS13: future spinal cord neural plate Present 3L
TS13: trunk unsegmented mesenchyme Present 3L
TS13: future hindbrain Present Regionally restricted 3L Expression is in the neural folds of the hindbrain.

Specimen 4C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: 1st branchial arch Present 4C
TS15: dermomyotome Present 4C
TS15: tail Present 4C
TS15: tail unsegmented mesenchyme Present 4C
TS15: trunk myotome Present 4C
TS15: head mesenchyme Present Regionally restricted 4C Craniofacial mesenchyme.
TS15: hindgut Present Regionally restricted 4C Expression is in hindgut endoderm.

Specimen 4F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: apical ectodermal ridge Present 4F
TS17: forelimb bud mesenchyme Present Regionally restricted 4F Expression is proximal.

Specimen 4I: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: future spinal cord Present 4I
TS19: footplate Present Regionally restricted 4I Expression is in proximal tissues.
TS19: handplate Present Regionally restricted 4I Expression is in proximal tissues.

Specimen 4J: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: future spinal cord Present 4J
TS19: footplate Present Regionally restricted 4J Expression is in proximal tissues.
TS19: handplate Present Regionally restricted 4J Expression is in proximal tissues.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory