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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423696
Gene symbol: Eci2
Gene name: enoyl-Coenzyme A delta isomerase 2
Probe: EB723 probe 163
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EB723; Specimen B268: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_B268_4_4B
TS22: central nervous system Strong Regionally restricted Embryo_B268_4_4B
TS22: telencephalon Strong Regionally restricted Embryo_B268_4_3B
TS22: cerebral cortex Strong Regionally restricted Embryo_B268_4_3B
TS22: neocortex Moderate Ubiquitous Embryo_B268_4_3B
TS22: olfactory cortex Absent
TS22: main olfactory bulb Absent
TS22: piriform cortex Absent
TS22: hippocampus Strong Ubiquitous Embryo_B268_4_3B
TS22: basal ganglia Weak Regionally restricted Embryo_B268_4_3B
TS22: corpus striatum Weak Ubiquitous Embryo_B268_4_1D Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Weak Ubiquitous Embryo_B268_4_3B
TS22: pallidum Weak Ubiquitous Embryo_B268_4_3B Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Regionally restricted Embryo_B268_4_3B
TS22: thalamus Strong Regionally restricted Embryo_B268_4_3B
TS22: hypothalamus Strong Regionally restricted Embryo_B268_4_3C
TS22: midbrain Strong Regionally restricted Embryo_B268_4_2D
TS22: pretectum Absent
TS22: superior colliculus Moderate Ubiquitous Embryo_B268_4_3A
TS22: inferior colliculus Moderate Ubiquitous Embryo_B268_4_3A
TS22: midbrain tegmentum Strong Regionally restricted Embryo_B268_4_2D
TS22: hindbrain Moderate Regionally restricted Embryo_B268_4_3B
TS22: cerebellum Moderate Ubiquitous Embryo_B268_4_3B
TS22: pons Strong Regionally restricted Embryo_B268_4_4B
TS22: medulla oblongata Strong Regionally restricted Embryo_B268_4_4B
TS22: spinal cord Moderate Regionally restricted Embryo_B268_4_3B
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Absent
TS22: retina Absent
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Weak Ubiquitous Embryo_B268_4_3B
TS22: olfactory epithelium Weak Ubiquitous Embryo_B268_4_3B
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Weak Regionally restricted Embryo_B268_4_3C Expression was weak in the digestive system.
TS22: intestine Weak Ubiquitous Embryo_B268_4_3D
TS22: salivary gland Weak Ubiquitous Embryo_B268_4_2C
TS22: tongue Weak Scattered Embryo_B268_4_3C
TS22: tooth Absent
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Weak Ubiquitous Embryo_B268_4_5C
TS22: respiratory system Weak Ubiquitous Embryo_B268_4_2C
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Weak Ubiquitous Embryo_B268_4_2C
TS22: urinary system Strong Regionally restricted Embryo_B268_4_2B Expression was strong in the genito-urinary system.
TS22: metanephros Strong Ubiquitous Embryo_B268_4_2B
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Absent
TS22: genital tubercle Absent
TS22: gonad Absent
TS22: gland Strong Regionally restricted Embryo_B268_4_3C Expression was strong in the endocrine system.
TS22: thyroid gland Weak Ubiquitous Embryo_B268_4_3B
TS22: pituitary gland Strong Regionally restricted Embryo_B268_4_3C
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Moderate Regionally restricted Embryo_B268_4_3B
TS22: heart Moderate Regionally restricted Embryo_B268_4_3B
TS22: heart atrium Moderate Regionally restricted Embryo_B268_4_3B
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Ubiquitous Embryo_B268_4_1D
TS22: face Weak Ubiquitous Embryo_B268_4_2A Expression was weak in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Weak Ubiquitous Embryo_B268_4_1C Expression was weak in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Weak Ubiquitous Embryo_B268_4_3B
TS22: forelimb Weak Ubiquitous Embryo_B268_4_1C
TS22: hindlimb Weak Ubiquitous Embryo_B268_4_1D
TS22: integumental system Absent
TS22: skin Absent
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory