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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423659
Gene symbol: Farsb
Gene name: phenylalanyl-tRNA synthetase, beta subunit
Probe: ES1125 probe 934
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen ES1125; Specimen S352: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_S352_4_3B
TS22: central nervous system Strong Regionally restricted Embryo_S352_4_4B
TS22: telencephalon Strong Regionally restricted Embryo_S352_4_4B
TS22: cerebral cortex Strong Regionally restricted Embryo_S352_4_4B
TS22: neocortex Moderate Regionally restricted Embryo_S352_4_4B
TS22: olfactory cortex Strong Regionally restricted Embryo_S352_4_4B
TS22: main olfactory bulb Strong Regionally restricted Embryo_S352_4_3B
TS22: piriform cortex Weak Regionally restricted Embryo_S352_4_1A
TS22: hippocampus Moderate Regionally restricted Embryo_S352_4_4B
TS22: basal ganglia Moderate Regionally restricted Embryo_S352_4_2A
TS22: corpus striatum Moderate Regionally restricted Embryo_S352_4_2A Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Moderate Regionally restricted Embryo_S352_4_3A
TS22: pallidum Weak Regionally restricted Embryo_S352_4_3A Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Regionally restricted Embryo_S352_4_2C
TS22: thalamus Weak Regionally restricted Embryo_S352_4_2C
TS22: hypothalamus Absent
TS22: midbrain Strong Regionally restricted Embryo_S352_4_3B
TS22: pretectum Absent
TS22: superior colliculus Weak Regionally restricted Embryo_S352_4_2C
TS22: inferior colliculus Strong Regionally restricted Embryo_S352_4_3B
TS22: midbrain tegmentum Weak Regionally restricted Embryo_S352_4_2C
TS22: hindbrain Strong Regionally restricted Embryo_S352_4_3A
TS22: cerebellum Weak Regionally restricted Embryo_S352_4_3A
TS22: pons Absent
TS22: medulla oblongata Strong Regionally restricted Embryo_S352_4_3A
TS22: spinal cord Moderate Regionally restricted Embryo_S352_4_3A
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Moderate Ubiquitous Embryo_S352_4_2C
TS22: cranial ganglion Moderate Ubiquitous Embryo_S352_4_2C
TS22: dorsal root ganglion Absent
TS22: eye Moderate Regionally restricted Embryo_S352_4_1A
TS22: retina Moderate Regionally restricted Embryo_S352_4_1A
TS22: lens Moderate Regionally restricted Embryo_S352_4_1A
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Strong Regionally restricted Embryo_S352_4_3A
TS22: olfactory epithelium Strong Regionally restricted Embryo_S352_4_3A
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_S352_4_3A Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_S352_4_4B
TS22: salivary gland Strong Regionally restricted Embryo_S352_4_3A
TS22: tongue Moderate Regionally restricted Embryo_S352_4_4B
TS22: tooth Strong Regionally restricted Embryo_S352_4_4B
TS22: palatal shelf Moderate Regionally restricted Embryo_S352_4_4A
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Moderate Regionally restricted Embryo_S352_4_1A
TS22: respiratory system Moderate Regionally restricted Embryo_S352_4_1A
TS22: pharynx Weak Regionally restricted Embryo_S352_4_4A
TS22: larynx Weak Regionally restricted Embryo_S352_4_4A
TS22: trachea Weak Regionally restricted Embryo_S352_4_4A
TS22: main bronchus Absent
TS22: lung Moderate Regionally restricted Embryo_S352_4_4A
TS22: urinary system Moderate Regionally restricted Embryo_S352_4_4A Expression was detected in the genito-urinary system.
TS22: metanephros Moderate Regionally restricted Embryo_S352_4_4A
TS22: ureter Absent
TS22: bladder Weak Regionally restricted Embryo_S352_4_4A
TS22: urethra Moderate Regionally restricted Embryo_S352_4_4A
TS22: reproductive system Moderate Regionally restricted Embryo_S352_4_4A
TS22: genital tubercle Moderate Regionally restricted Embryo_S352_4_4A
TS22: gonad Weak Regionally restricted Embryo_S352_4_1C
TS22: gland Moderate Regionally restricted Embryo_S352_4_2B Expression was detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Weak Regionally restricted Embryo_S352_4_4A
TS22: pancreas Moderate Regionally restricted Embryo_S352_4_2B
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Moderate Regionally restricted Embryo_S352_4_3C Expression was detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Moderate Regionally restricted Embryo_S352_4_3C
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Strong Regionally restricted Embryo_S352_4_1A
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Strong Regionally restricted Embryo_S352_4_4A
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Moderate Regionally restricted Embryo_S352_4_5B
TS22: forelimb Moderate Regionally restricted Embryo_S352_4_1A
TS22: hindlimb Moderate Regionally restricted Embryo_S352_4_1A
TS22: integumental system Moderate Regionally restricted Embryo_S352_4_1A
TS22: skin Moderate Regionally restricted Embryo_S352_4_1A
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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