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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423521
Gene symbol: Scd2
Gene name: stearoyl-Coenzyme A desaturase 2
Probe: EH2751 probe 2673
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EH2751; Specimen C3324: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C3324_3_3C
TS22: central nervous system Strong Regionally restricted Embryo_C3324_3_3C
TS22: telencephalon Strong Regionally restricted Embryo_C3324_3_3C
TS22: cerebral cortex Strong Regionally restricted Embryo_C3324_3_3C
TS22: neocortex Strong Regionally restricted Embryo_C3324_3_3C
TS22: olfactory cortex Moderate Regionally restricted Embryo_C3324_3_3C
TS22: main olfactory bulb Moderate Ubiquitous Embryo_C3324_3_3C
TS22: piriform cortex Absent
TS22: hippocampus Strong Ubiquitous Embryo_C3324_3_2D
TS22: corpus striatum Strong Regionally restricted Embryo_C3324_3_1C Expression was strong in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Weak Ubiquitous Embryo_C3324_3_1B
TS22: telencephalon septum Moderate Ubiquitous
TS22: pallidum Moderate Ubiquitous Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Absent
TS22: thalamus Absent
TS22: hypothalamus Absent
TS22: midbrain Strong Regionally restricted Embryo_C3324_3_4C
TS22: pretectum Absent
TS22: superior colliculus Strong Regionally restricted Embryo_C3324_3_3B
TS22: inferior colliculus Strong Ubiquitous Embryo_C3324_3_4C
TS22: midbrain tegmentum Strong Regionally restricted Embryo_C3324_3_3D
TS22: hindbrain Strong Regionally restricted Embryo_C3324_3_4A
TS22: cerebellum Strong Regionally restricted Embryo_C3324_3_4A
TS22: pons Moderate Regionally restricted Embryo_C3324_3_4A
TS22: medulla oblongata Strong Regionally restricted Embryo_C3324_3_4A
TS22: spinal cord Moderate Ubiquitous Embryo_C3324_3_4A
TS22: choroid plexus Weak Regionally restricted Embryo_C3324_3_3D
TS22: meninges Moderate Regionally restricted Embryo_C3324_3_1C
TS22: peripheral nervous system Strong Ubiquitous Embryo_C3324_3_5B
TS22: cranial ganglion Moderate Ubiquitous Embryo_C3324_3_2A
TS22: dorsal root ganglion Strong Ubiquitous Embryo_C3324_3_5B
TS22: eye Strong Regionally restricted Embryo_C3324_3_1A
TS22: retina Strong Ubiquitous Embryo_C3324_3_1A
TS22: lens Strong Regionally restricted Embryo_C3324_3_1A
TS22: cornea Absent
TS22: optic nerve Strong Ubiquitous Embryo_C3324_3_2C
TS22: nose Strong Regionally restricted Embryo_C3324_3_3B
TS22: olfactory epithelium Strong Regionally restricted Embryo_C3324_3_3B
TS22: ear Strong Regionally restricted Embryo_C3324_3_3B
TS22: inner ear Strong Regionally restricted Embryo_C3324_3_3B
TS22: cochlea Strong Regionally restricted Embryo_C3324_3_3B
TS22: inner ear labyrinth Strong Regionally restricted Embryo_C3324_3_1C
TS22: middle ear Strong Ubiquitous Embryo_C3324_3_1A
TS22: alimentary system Strong Regionally restricted Embryo_C3324_3_3B Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_C3324_3_4C
TS22: salivary gland Strong Ubiquitous Embryo_C3324_3_3B
TS22: tongue Moderate Regionally restricted Embryo_C3324_3_4C
TS22: tooth Strong Ubiquitous Embryo_C3324_3_3C
TS22: palatal shelf Strong Regionally restricted Embryo_C3324_3_3A
TS22: esophagus Strong Regionally restricted Embryo_C3324_3_4B
TS22: stomach Strong Regionally restricted Embryo_C3324_3_2A
TS22: liver Strong Ubiquitous Embryo_C3324_3_4A
TS22: respiratory system Strong Ubiquitous Embryo_C3324_3_3D
TS22: pharynx Strong Ubiquitous Embryo_C3324_3_4B
TS22: larynx Strong Ubiquitous Embryo_C3324_3_4B
TS22: trachea Strong Regionally restricted Embryo_C3324_3_4C
TS22: main bronchus Strong Regionally restricted Embryo_C3324_3_3D
TS22: lung Strong Regionally restricted Embryo_C3324_3_3B
TS22: urinary system Strong Regionally restricted Embryo_C3324_3_3A Expression was strong in the genito-urinary system.
TS22: metanephros Strong Ubiquitous Embryo_C3324_3_3B
TS22: ureter Moderate Regionally restricted Embryo_C3324_3_4C
TS22: bladder Moderate Ubiquitous Embryo_C3324_3_4B
TS22: urethra Strong Regionally restricted Embryo_C3324_3_4B
TS22: reproductive system Strong Regionally restricted Embryo_C3324_3_3A
TS22: genital tubercle Strong Regionally restricted Embryo_C3324_3_4B
TS22: gonad Strong Regionally restricted Embryo_C3324_3_3A
TS22: gland Strong Regionally restricted Embryo_C3324_3_3D Expression was strong in the endocrine system.
TS22: thyroid gland Strong Regionally restricted Embryo_C3324_3_3D
TS22: pituitary gland Moderate Ubiquitous Embryo_C3324_3_4A
TS22: pancreas Strong Regionally restricted Embryo_C3324_3_3B
TS22: adrenal gland Strong Ubiquitous Embryo_C3324_3_3C
TS22: cardiovascular system Strong Regionally restricted Embryo_C3324_3_4B
TS22: heart Strong Regionally restricted Embryo_C3324_3_4B
TS22: heart atrium Strong Regionally restricted Embryo_C3324_3_4B
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Strong Ubiquitous Embryo_C3324_3_4A Expression was strong in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Strong Ubiquitous Embryo_C3324_3_4A
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Strong Ubiquitous Embryo_C3324_3_1C
TS22: face Strong Ubiquitous Embryo_C3324_3_1D Expression was strong in the face/soft tissues.
TS22: facial bone primordium Strong Regionally restricted Embryo_C3324_3_3C
TS22: cranium Strong Regionally restricted Embryo_C3324_3_2A Expression was strong in the skull (base and vault).
TS22: axial skeleton Strong Regionally restricted Embryo_C3324_3_1C
TS22: tail Strong Regionally restricted Embryo_C3324_3_3C
TS22: forelimb Strong Regionally restricted Embryo_C3324_3_1C
TS22: hindlimb Strong Regionally restricted Embryo_C3324_3_1C
TS22: integumental system Strong Regionally restricted Embryo_C3324_3_2C
TS22: skin Strong Regionally restricted Embryo_C3324_3_1C
TS22: hair Strong Regionally restricted Embryo_C3324_3_2C
TS22: vibrissa follicle Strong Regionally restricted Embryo_C3324_3_2C Expression was strong in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/28/2024
MGI 6.13 		The Jackson Laboratory