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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423347
Gene symbol: Mars1
Gene name: methionine-tRNA synthetase 1
Probe: ES1145 probe 1131
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen ES1145; Specimen S416: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_S416_5_3C
TS22: central nervous system Strong Regionally restricted Embryo_S416_5_3C
TS22: telencephalon Strong Regionally restricted Embryo_S416_5_3C
TS22: cerebral cortex Strong Regionally restricted Embryo_S416_5_3C
TS22: neocortex Strong Regionally restricted Embryo_S416_5_3C
TS22: olfactory cortex Weak Ubiquitous Embryo_S416_5_3C
TS22: main olfactory bulb Weak Ubiquitous Embryo_S416_5_3C
TS22: piriform cortex Weak Ubiquitous Embryo_S416_5_1C
TS22: hippocampus Moderate Ubiquitous Embryo_S416_5_3C
TS22: basal ganglia Moderate Regionally restricted Embryo_S416_5_3B
TS22: corpus striatum Moderate Regionally restricted Embryo_S416_5_2B Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Weak Ubiquitous Embryo_S416_5_1C
TS22: telencephalon septum Moderate Regionally restricted Embryo_S416_5_3C
TS22: pallidum Moderate Regionally restricted Embryo_S416_5_3B Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Regionally restricted Embryo_S416_5_3C
TS22: thalamus Strong Regionally restricted Embryo_S416_5_3C
TS22: hypothalamus Moderate Regionally restricted Embryo_S416_5_3C
TS22: midbrain Strong Regionally restricted Embryo_S416_5_3C
TS22: pretectum Weak Ubiquitous Embryo_S416_5_3B
TS22: superior colliculus Strong Regionally restricted Embryo_S416_5_3C
TS22: inferior colliculus Moderate Ubiquitous Embryo_S416_5_3C
TS22: midbrain tegmentum Strong Regionally restricted Embryo_S416_5_3C
TS22: hindbrain Moderate Regionally restricted Embryo_S416_5_3C
TS22: cerebellum Moderate Regionally restricted Embryo_S416_5_3C
TS22: pons Moderate Regionally restricted Embryo_S416_5_3C
TS22: medulla oblongata Moderate Regionally restricted Embryo_S416_5_3C
TS22: spinal cord Weak Ubiquitous Embryo_S416_5_3C
TS22: choroid plexus Strong Regionally restricted Embryo_S416_5_3C
TS22: meninges Strong Regionally restricted Embryo_S416_5_1C
TS22: peripheral nervous system Moderate Ubiquitous Embryo_S416_5_2B
TS22: cranial ganglion Moderate Ubiquitous Embryo_S416_5_2B
TS22: dorsal root ganglion Moderate Ubiquitous Embryo_S416_5_2B
TS22: eye Weak Ubiquitous Embryo_S416_5_1A
TS22: retina Weak Ubiquitous Embryo_S416_5_1C
TS22: lens Weak Ubiquitous Embryo_S416_5_1A
TS22: cornea Weak Ubiquitous Embryo_S416_5_1B
TS22: optic nerve Weak Ubiquitous Embryo_S416_5_2D
TS22: nose Weak Ubiquitous Embryo_S416_5_3C
TS22: olfactory epithelium Weak Ubiquitous Embryo_S416_5_3C
TS22: ear Weak Regionally restricted Embryo_S416_5_2B
TS22: inner ear Weak Ubiquitous Embryo_S416_5_2B
TS22: cochlea Weak Ubiquitous Embryo_S416_5_2D
TS22: inner ear labyrinth Weak Ubiquitous Embryo_S416_5_2B
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_S416_5_1C Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_S416_5_4A
TS22: salivary gland Weak Ubiquitous Embryo_S416_5_2B
TS22: tongue Weak Ubiquitous Embryo_S416_5_3C
TS22: tooth Weak Ubiquitous Embryo_S416_5_3D
TS22: palatal shelf Moderate Ubiquitous Embryo_S416_5_3C
TS22: esophagus Moderate Regionally restricted Embryo_S416_5_3B
TS22: stomach Strong Regionally restricted Embryo_S416_5_1C
TS22: liver Moderate Ubiquitous Embryo_S416_5_1C
TS22: respiratory system Weak Ubiquitous Embryo_S416_5_2B
TS22: pharynx Weak Ubiquitous Embryo_S416_5_3B
TS22: larynx Weak Ubiquitous Embryo_S416_5_3B
TS22: trachea Weak Ubiquitous Embryo_S416_5_3B
TS22: main bronchus Weak Ubiquitous Embryo_S416_5_2D
TS22: lung Weak Ubiquitous Embryo_S416_5_2B
TS22: urinary system Strong Regionally restricted Embryo_S416_5_3D Expression was strong in the genito-urinary system.
TS22: metanephros Weak Ubiquitous Embryo_S416_5_2C
TS22: ureter Absent
TS22: bladder Weak Ubiquitous Embryo_S416_5_4A
TS22: urethra Weak Ubiquitous Embryo_S416_5_4A
TS22: reproductive system Strong Regionally restricted Embryo_S416_5_3D
TS22: genital tubercle Strong Regionally restricted Embryo_S416_5_3D
TS22: gonad Weak Ubiquitous Embryo_S416_5_2A
TS22: gland Weak Ubiquitous Embryo_S416_5_3A Expression was weak in the endocrine system.
TS22: thyroid gland Weak Ubiquitous Embryo_S416_5_3A
TS22: pituitary gland Weak Ubiquitous Embryo_S416_5_3B
TS22: pancreas Weak Ubiquitous Embryo_S416_5_3A
TS22: adrenal gland Weak Ubiquitous Embryo_S416_5_2C
TS22: cardiovascular system Moderate Regionally restricted Embryo_S416_5_3B
TS22: heart Moderate Regionally restricted Embryo_S416_5_3B
TS22: heart atrium Moderate Regionally restricted Embryo_S416_5_3B
TS22: heart ventricle Moderate Regionally restricted Embryo_S416_5_3B
TS22: blood vessel Moderate Regionally restricted Embryo_S416_5_3B
TS22: hemolymphoid system Weak Ubiquitous Embryo_S416_5_3A Expression was weak in the immune system.
TS22: spleen primordium Weak Ubiquitous Embryo_S416_5_1C
TS22: thymus primordium Weak Ubiquitous Embryo_S416_5_3A
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Ubiquitous Embryo_S416_5_1B
TS22: face Weak Ubiquitous Embryo_S416_5_2C Expression was weak in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Strong Regionally restricted Embryo_S416_5_3D
TS22: forelimb Strong Regionally restricted Embryo_S416_5_1C
TS22: hindlimb Strong Regionally restricted Embryo_S416_5_1C
TS22: integumental system Strong Regionally restricted Embryo_S416_5_1C
TS22: skin Strong Regionally restricted Embryo_S416_5_1C
TS22: hair Weak Ubiquitous Embryo_S416_5_2C
TS22: vibrissa follicle Weak Ubiquitous Embryo_S416_5_2C Expression was weak in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
MGI 6.23 		The Jackson Laboratory