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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423034
Gene symbol: Ncam2
Gene name: neural cell adhesion molecule 2
Probe: MY217 probe 121
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MY217; Specimen C1286: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1286_1_4A
TS22: central nervous system Strong Regionally restricted Embryo_C1286_1_4A
TS22: telencephalon Strong Regionally restricted Embryo_C1286_1_2D
TS22: cerebral cortex Strong Regionally restricted Embryo_C1286_1_2D
TS22: neocortex Moderate Regionally restricted Embryo_C1286_1_4B
TS22: olfactory cortex Strong Regionally restricted Embryo_C1286_1_2D
TS22: main olfactory bulb Strong Regionally restricted Embryo_C1286_1_2D
TS22: piriform cortex Moderate Regionally restricted Embryo_C1286_1_1D
TS22: hippocampus Moderate Regionally restricted Embryo_C1286_1_1C
TS22: basal ganglia Moderate Regionally restricted Embryo_C1286_1_2B
TS22: corpus striatum Moderate Regionally restricted Embryo_C1286_1_2B Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Weak Regionally restricted Embryo_C1286_1_3A
TS22: amygdala Weak Regionally restricted Embryo_C1286_1_1D
TS22: telencephalon septum Moderate Regionally restricted Embryo_C1286_1_3D
TS22: pallidum Weak Regionally restricted Embryo_C1286_1_3A Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_C1286_1_4A
TS22: thalamus Strong Regionally restricted Embryo_C1286_1_4A
TS22: hypothalamus Moderate Regionally restricted Embryo_C1286_1_3D
TS22: midbrain Moderate Regionally restricted Embryo_C1286_1_3B
TS22: pretectum Weak Regionally restricted Embryo_C1286_1_4A
TS22: superior colliculus Moderate Regionally restricted Embryo_C1286_1_4A
TS22: inferior colliculus Weak Regionally restricted Embryo_C1286_1_3C
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_C1286_1_3B
TS22: hindbrain Moderate Regionally restricted Embryo_C1286_1_3C
TS22: cerebellum Moderate Regionally restricted Embryo_C1286_1_3C
TS22: pons Moderate Regionally restricted Embryo_C1286_1_5A
TS22: medulla oblongata Moderate Regionally restricted Embryo_C1286_1_3A
TS22: spinal cord Strong Regionally restricted Embryo_C1286_1_4A
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Strong Regionally restricted Embryo_C1286_1_5A
TS22: cranial ganglion Strong Regionally restricted Embryo_C1286_1_5A
TS22: dorsal root ganglion Strong Regionally restricted Embryo_C1286_1_2C
TS22: eye Absent
TS22: retina Absent
TS22: optic nerve Absent
TS22: nose Strong Regionally restricted Embryo_C1286_1_3A
TS22: olfactory epithelium Strong Regionally restricted Embryo_C1286_1_3A
TS22: ear Weak Regionally restricted Embryo_C1286_1_2D
TS22: inner ear Weak Regionally restricted Embryo_C1286_1_2D
TS22: cochlea Weak Regionally restricted Embryo_C1286_1_2D
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_C1286_1_3C Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C1286_1_3A
TS22: salivary gland Absent
TS22: tongue Strong Regionally restricted Embryo_C1286_1_4A
TS22: tooth Absent
TS22: palatal shelf Strong Regionally restricted Embryo_C1286_1_3C
TS22: esophagus Absent
TS22: stomach Moderate Regionally restricted Embryo_C1286_1_5B
TS22: liver Absent
TS22: respiratory system Weak Regionally restricted Embryo_C1286_1_3D
TS22: pharynx Absent
TS22: larynx Weak Regionally restricted Embryo_C1286_1_3D
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Absent
TS22: urinary system Strong Regionally restricted Embryo_C1286_1_3B Expression was strong in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_C1286_1_4C
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Strong Regionally restricted Embryo_C1286_1_3B
TS22: genital tubercle Strong Regionally restricted Embryo_C1286_1_3B
TS22: gonad Absent
TS22: gland Weak Regionally restricted Embryo_C1286_1_3C Expression was weak in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Weak Regionally restricted Embryo_C1286_1_3C
TS22: pancreas Absent
TS22: adrenal gland Weak Regionally restricted Embryo_C1286_1_4C
TS22: cardiovascular system Weak Regionally restricted Embryo_C1286_1_3C
TS22: heart Weak Regionally restricted Embryo_C1286_1_3C
TS22: heart atrium Absent
TS22: heart ventricle Weak Regionally restricted Embryo_C1286_1_3C
TS22: blood vessel Absent
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Moderate Regionally restricted Embryo_C1286_1_2D Expression was detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Moderate Regionally restricted Embryo_C1286_1_3A
TS22: forelimb Strong Regionally restricted Embryo_C1286_1_6D
TS22: hindlimb Strong Regionally restricted Embryo_C1286_1_6B
TS22: integumental system Strong Regionally restricted Embryo_C1286_1_4A
TS22: skin Strong Regionally restricted Embryo_C1286_1_4A
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory