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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5422819
Gene symbol: Gars1
Gene name: glycyl-tRNA synthetase 1
Probe: MH2574 probe 2187
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH2574; Specimen C3136: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Moderate Regionally restricted Embryo_C3136_6_4B
TS22: central nervous system Moderate Regionally restricted Embryo_C3136_6_4B
TS22: telencephalon Moderate Regionally restricted Embryo_C3136_6_4B
TS22: cerebral cortex Moderate Regionally restricted Embryo_C3136_6_3A
TS22: neocortex Moderate Scattered Embryo_C3136_6_2D
TS22: olfactory cortex Moderate Regionally restricted Embryo_C3136_6_3A
TS22: main olfactory bulb Moderate Scattered Embryo_C3136_6_3A
TS22: piriform cortex Moderate Scattered Embryo_C3136_6_1C
TS22: hippocampus Absent
TS22: basal ganglia Moderate Regionally restricted Embryo_C3136_6_1D
TS22: corpus striatum Moderate Scattered Embryo_C3136_6_1D Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Moderate Scattered Embryo_C3136_6_1C
TS22: telencephalon septum Moderate Scattered Embryo_C3136_6_4B
TS22: pallidum Moderate Scattered Embryo_C3136_6_4B Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Scattered Embryo_C3136_6_4B
TS22: thalamus Moderate Scattered Embryo_C3136_6_4B
TS22: hypothalamus Moderate Scattered Embryo_C3136_6_4B
TS22: midbrain Moderate Scattered Embryo_C3136_6_4B
TS22: pretectum Moderate Scattered Embryo_C3136_6_4B
TS22: superior colliculus Moderate Scattered Embryo_C3136_6_4B
TS22: inferior colliculus Moderate Scattered Embryo_C3136_6_4B
TS22: midbrain tegmentum Moderate Scattered Embryo_C3136_6_4B
TS22: hindbrain Moderate Scattered Embryo_C3136_6_4B
TS22: cerebellum Moderate Scattered Embryo_C3136_6_4B
TS22: pons Moderate Scattered Embryo_C3136_6_4B
TS22: medulla oblongata Moderate Scattered Embryo_C3136_6_4B
TS22: spinal cord Moderate Scattered Embryo_C3136_6_5A
TS22: choroid plexus Moderate Scattered Embryo_C3136_6_2A
TS22: meninges Absent
TS22: peripheral nervous system Weak Regionally restricted Embryo_C3136_6_2B
TS22: cranial ganglion Weak Scattered Embryo_C3136_6_2B
TS22: dorsal root ganglion Absent
TS22: eye Absent
TS22: retina Absent
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_C3136_6_6A Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_C3136_6_6A
TS22: salivary gland Moderate Regionally restricted Embryo_C3136_6_6B
TS22: tongue Moderate Regionally restricted Embryo_C3136_6_4A
TS22: tooth Absent
TS22: palatal shelf Moderate Regionally restricted Embryo_C3136_6_4C
TS22: esophagus Absent
TS22: stomach Weak Scattered Embryo_C3136_6_2A
TS22: liver Strong Ubiquitous Embryo_C3136_6_1A
TS22: respiratory system Moderate Regionally restricted Embryo_C3136_6_6A
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Moderate Scattered Embryo_C3136_6_6A
TS22: urinary system Strong Regionally restricted Embryo_C3136_6_5C Expression was strong in the genito-urinary system.
TS22: metanephros Strong Scattered Embryo_C3136_6_5C
TS22: ureter Absent
TS22: bladder Moderate Regionally restricted Embryo_C3136_6_4B
TS22: urethra Absent
TS22: reproductive system Absent
TS22: genital tubercle Absent
TS22: gonad Absent
TS22: gland Strong Regionally restricted Embryo_C3136_6_5C Expression was strong in the endocrine system.
TS22: thyroid gland Strong Scattered Embryo_C3136_6_4D
TS22: pituitary gland Moderate Regionally restricted Embryo_C3136_6_3C
TS22: pancreas Moderate Scattered Embryo_C3136_6_3B
TS22: adrenal gland Strong Scattered Embryo_C3136_6_5C
TS22: cardiovascular system Strong Regionally restricted Embryo_C3136_6_4B
TS22: heart Strong Regionally restricted Embryo_C3136_6_5A
TS22: heart atrium Strong Ubiquitous Embryo_C3136_6_6A
TS22: heart ventricle Strong Regionally restricted Embryo_C3136_6_5A
TS22: blood vessel Strong Regionally restricted Embryo_C3136_6_4B
TS22: hemolymphoid system Strong Scattered Embryo_C3136_6_4D Expression was strong in the immune system.
TS22: spleen primordium Strong Regionally restricted Embryo_C3136_6_2A
TS22: thymus primordium Strong Scattered Embryo_C3136_6_4D
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Moderate Scattered Embryo_C3136_6_1C
TS22: face Moderate Scattered Embryo_C3136_6_1B Expression was detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Moderate Scattered Embryo_C3136_6_3C
TS22: forelimb Moderate Regionally restricted Embryo_C3136_6_1A
TS22: hindlimb Moderate Regionally restricted Embryo_C3136_6_1A
TS22: integumental system Absent
TS22: skin Absent
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory