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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5422785
Gene symbol: Tmeff1
Gene name: transmembrane protein with EGF-like and two follistatin-like domains 1
Probe: HD31 probe 10
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen HD31; Specimen C1224: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1224_2_4A
TS22: central nervous system Strong Regionally restricted Embryo_C1224_2_4A
TS22: telencephalon Strong Regionally restricted Embryo_C1224_2_3C
TS22: cerebral cortex Strong Regionally restricted Embryo_C1224_2_3C
TS22: neocortex Strong Regionally restricted Embryo_C1224_2_3C
TS22: olfactory cortex Strong Regionally restricted Embryo_C1224_2_5B
TS22: main olfactory bulb Strong Regionally restricted Embryo_C1224_2_5B
TS22: piriform cortex Moderate Regionally restricted Embryo_C1224_2_2B
TS22: hippocampus Strong Regionally restricted Embryo_C1224_2_2C
TS22: basal ganglia Moderate Regionally restricted Embryo_C1224_2_4B
TS22: corpus striatum Weak Regionally restricted Embryo_C1224_2_2B Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Moderate Regionally restricted Embryo_C1224_2_3B
TS22: amygdala Moderate Regionally restricted Embryo_C1224_2_2C
TS22: telencephalon septum Moderate Regionally restricted Embryo_C1224_2_4B
TS22: pallidum Weak Regionally restricted Embryo_C1224_2_5A Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_C1224_2_4A
TS22: thalamus Moderate Regionally restricted Embryo_C1224_2_4C
TS22: hypothalamus Strong Regionally restricted Embryo_C1224_2_4A
TS22: midbrain Strong Regionally restricted Embryo_C1224_2_4C
TS22: pretectum Strong Regionally restricted Embryo_C1224_2_4B
TS22: superior colliculus Strong Regionally restricted Embryo_C1224_2_4C
TS22: inferior colliculus Strong Regionally restricted Embryo_C1224_2_4C
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_C1224_2_4B
TS22: hindbrain Strong Regionally restricted Embryo_C1224_2_4A
TS22: cerebellum Moderate Regionally restricted Embryo_C1224_2_3A
TS22: pons Moderate Regionally restricted Embryo_C1224_2_4B
TS22: medulla oblongata Strong Regionally restricted Embryo_C1224_2_4A
TS22: spinal cord Strong Regionally restricted Embryo_C1224_2_4A
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Strong Regionally restricted Embryo_C1224_2_5B
TS22: cranial ganglion Strong Regionally restricted Embryo_C1224_2_3A
TS22: dorsal root ganglion Strong Regionally restricted Embryo_C1224_2_5B
TS22: eye Strong Regionally restricted Embryo_C1224_2_1C
TS22: retina Strong Regionally restricted Embryo_C1224_2_1C
TS22: lens Absent
TS22: cornea Weak Regionally restricted Embryo_C1224_2_1A
TS22: optic nerve Absent
TS22: nose Moderate Regionally restricted Embryo_C1224_2_5B
TS22: olfactory epithelium Moderate Regionally restricted Embryo_C1224_2_5B
TS22: ear Strong Regionally restricted Embryo_C1224_2_5B
TS22: inner ear Strong Regionally restricted Embryo_C1224_2_5B
TS22: cochlea Strong Regionally restricted Embryo_C1224_2_5B
TS22: inner ear labyrinth Absent
TS22: middle ear Weak Regionally restricted Embryo_C1224_2_1A
TS22: alimentary system Strong Regionally restricted Embryo_C1224_2_4B Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C1224_2_4B
TS22: salivary gland Strong Regionally restricted Embryo_C1224_2_5B
TS22: tongue Strong Regionally restricted Embryo_C1224_2_4B
TS22: tooth Moderate Regionally restricted Embryo_C1224_2_4D
TS22: palatal shelf Moderate Regionally restricted Embryo_C1224_2_4C
TS22: esophagus Weak Regionally restricted Embryo_C1224_2_4B
TS22: stomach Moderate Regionally restricted Embryo_C1224_2_2B
TS22: liver Weak Regionally restricted Embryo_C1224_2_4A
TS22: respiratory system Moderate Regionally restricted Embryo_C1224_2_4B
TS22: pharynx Moderate Regionally restricted Embryo_C1224_2_4B
TS22: larynx Weak Regionally restricted Embryo_C1224_2_4A
TS22: trachea Weak Regionally restricted Embryo_C1224_2_4B
TS22: main bronchus Weak Regionally restricted Embryo_C1224_2_4C
TS22: lung Moderate Regionally restricted Embryo_C1224_2_5B
TS22: urinary system Strong Regionally restricted Embryo_C1224_2_3B Expression was strong in the genito-urinary system.
TS22: metanephros Strong Regionally restricted Embryo_C1224_2_3B
TS22: ureter Weak Regionally restricted Embryo_C1224_2_4A
TS22: bladder Weak Regionally restricted Embryo_C1224_2_4B
TS22: urethra Absent
TS22: reproductive system Moderate Regionally restricted Embryo_C1224_2_4A
TS22: genital tubercle Moderate Regionally restricted Embryo_C1224_2_4A
TS22: gonad Weak Regionally restricted Embryo_C1224_2_2C
TS22: gland Moderate Regionally restricted Embryo_C1224_2_4B Expression was detected in the endocrine system.
TS22: thyroid gland Weak Regionally restricted Embryo_C1224_2_4C
TS22: pituitary gland Moderate Regionally restricted Embryo_C1224_2_4B
TS22: pancreas Moderate Regionally restricted Embryo_C1224_2_3C
TS22: adrenal gland Weak Regionally restricted Embryo_C1224_2_3B
TS22: cardiovascular system Moderate Regionally restricted Embryo_C1224_2_5A
TS22: heart Weak Regionally restricted Embryo_C1224_2_4B
TS22: heart atrium Weak Regionally restricted Embryo_C1224_2_4B
TS22: heart ventricle Weak Regionally restricted Embryo_C1224_2_4B
TS22: blood vessel Moderate Regionally restricted Embryo_C1224_2_5A
TS22: hemolymphoid system Weak Regionally restricted Embryo_C1224_2_2B Expression was weak in the immune system.
TS22: spleen primordium Weak Regionally restricted Embryo_C1224_2_2B
TS22: thymus primordium Weak Regionally restricted Embryo_C1224_2_4C
TS22: appendicular skeleton Weak Regionally restricted Embryo_C1224_2_3C Expression was weak in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Regionally restricted Embryo_C1224_2_1C
TS22: face Moderate Regionally restricted Embryo_C1224_2_4C Expression was detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Weak Regionally restricted Embryo_C1224_2_4B
TS22: tail Moderate Regionally restricted Embryo_C1224_2_4B
TS22: forelimb Strong Regionally restricted Embryo_C1224_2_1A
TS22: hindlimb Strong Regionally restricted Embryo_C1224_2_2A
TS22: integumental system Strong Regionally restricted Embryo_C1224_2_5A
TS22: skin Strong Regionally restricted Embryo_C1224_2_5A
TS22: hair Moderate Regionally restricted Embryo_C1224_2_2B
TS22: vibrissa follicle Moderate Regionally restricted Embryo_C1224_2_2B Expression was detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory