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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5422648
Gene symbol: Trim25
Gene name: tripartite motif-containing 25
Probe: T55205
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen ST84; Specimen C1617: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1617_5_2A
TS22: central nervous system Moderate Regionally restricted Embryo_C1617_5_4C
TS22: telencephalon Weak Regionally restricted Embryo_C1617_5_6A
TS22: cerebral cortex Weak Scattered Embryo_C1617_5_4C
TS22: neocortex Weak Scattered Embryo_C1617_5_4C
TS22: olfactory cortex Weak Scattered Embryo_C1617_5_3C
TS22: main olfactory bulb Weak Scattered Embryo_C1617_5_3C
TS22: piriform cortex Weak Scattered Embryo_C1617_5_1C
TS22: hippocampus Weak Scattered Embryo_C1617_5_4C
TS22: basal ganglia Weak Regionally restricted Embryo_C1617_5_6A
TS22: corpus striatum Weak Scattered Embryo_C1617_5_6A Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Weak Scattered Embryo_C1617_5_1C
TS22: telencephalon septum Weak Scattered Embryo_C1617_5_4B
TS22: pallidum Weak Scattered Embryo_C1617_5_5A Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Scattered Embryo_C1617_5_4A
TS22: thalamus Weak Scattered Embryo_C1617_5_4A
TS22: hypothalamus Weak Scattered Embryo_C1617_5_4B
TS22: midbrain Weak Scattered Embryo_C1617_5_4A
TS22: pretectum Weak Scattered Embryo_C1617_5_4A
TS22: superior colliculus Weak Scattered Embryo_C1617_5_3A
TS22: inferior colliculus Weak Scattered Embryo_C1617_5_4A
TS22: midbrain tegmentum Weak Scattered Embryo_C1617_5_4A
TS22: hindbrain Weak Regionally restricted Embryo_C1617_5_2C
TS22: cerebellum Weak Scattered Embryo_C1617_5_4B
TS22: pons Weak Scattered Embryo_C1617_5_3C
TS22: medulla oblongata Weak Regionally restricted Embryo_C1617_5_2C
TS22: spinal cord Weak Regionally restricted Embryo_C1617_5_2C
TS22: choroid plexus Weak Regionally restricted Embryo_C1617_5_3B
TS22: meninges Moderate Regionally restricted Embryo_C1617_5_4C
TS22: peripheral nervous system Strong Regionally restricted Embryo_C1617_5_2A
TS22: cranial ganglion Strong Regionally restricted Embryo_C1617_5_2A
TS22: dorsal root ganglion Weak Regionally restricted Embryo_C1617_5_4A
TS22: eye Weak Regionally restricted Embryo_C1617_5_1A
TS22: retina Weak Regionally restricted Embryo_C1617_5_1A
TS22: lens Absent
TS22: optic nerve Absent
TS22: nose Moderate Regionally restricted Embryo_C1617_5_4C
TS22: olfactory epithelium Moderate Regionally restricted Embryo_C1617_5_4C
TS22: ear Weak Regionally restricted Embryo_C1617_5_2C
TS22: inner ear Weak Regionally restricted Embryo_C1617_5_2C
TS22: cochlea Weak Regionally restricted Embryo_C1617_5_2C
TS22: inner ear labyrinth Weak Regionally restricted Embryo_C1617_5_1B
TS22: middle ear Weak Regionally restricted Embryo_C1617_5_6A
TS22: alimentary system Strong Regionally restricted Embryo_C1617_5_2A Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C1617_5_4A
TS22: salivary gland Moderate Regionally restricted Embryo_C1617_5_2C
TS22: tongue Moderate Regionally restricted Embryo_C1617_5_3C
TS22: tooth Moderate Regionally restricted Embryo_C1617_5_4C
TS22: palatal shelf Weak Regionally restricted Embryo_C1617_5_4A
TS22: esophagus Weak Regionally restricted Embryo_C1617_5_3B
TS22: stomach Moderate Regionally restricted Embryo_C1617_5_5A
TS22: liver Strong Regionally restricted Embryo_C1617_5_2A
TS22: respiratory system Moderate Regionally restricted Embryo_C1617_5_2A
TS22: pharynx Weak Regionally restricted Embryo_C1617_5_3C
TS22: larynx Weak Regionally restricted Embryo_C1617_5_3C
TS22: trachea Weak Regionally restricted Embryo_C1617_5_3B
TS22: main bronchus Moderate Regionally restricted Embryo_C1617_5_4A
TS22: lung Moderate Regionally restricted Embryo_C1617_5_2A
TS22: urinary system Weak Regionally restricted Embryo_C1617_5_4A Expression was weak in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_C1617_5_2A
TS22: ureter Weak Regionally restricted Embryo_C1617_5_4A
TS22: bladder Weak Regionally restricted Embryo_C1617_5_4A
TS22: urethra Weak Regionally restricted Embryo_C1617_5_3D
TS22: reproductive system Weak Regionally restricted Embryo_C1617_5_1C
TS22: genital tubercle Weak Regionally restricted Embryo_C1617_5_4B
TS22: gonad Weak Regionally restricted Embryo_C1617_5_1C
TS22: gland Strong Regionally restricted Embryo_C1617_5_4B Expression was strong in the endocrine system.
TS22: thyroid gland Moderate Regionally restricted Embryo_C1617_5_4A
TS22: pituitary gland Weak Regionally restricted Embryo_C1617_5_4A
TS22: pancreas Moderate Regionally restricted Embryo_C1617_5_4C
TS22: adrenal gland Strong Regionally restricted Embryo_C1617_5_4B
TS22: cardiovascular system Moderate Regionally restricted Embryo_C1617_5_3A
TS22: heart Moderate Regionally restricted Embryo_C1617_5_3A
TS22: heart atrium Moderate Regionally restricted Embryo_C1617_5_3A
TS22: heart ventricle Moderate Regionally restricted Embryo_C1617_5_4A
TS22: blood vessel Absent
TS22: hemolymphoid system Moderate Regionally restricted Embryo_C1617_5_4A Expression was detected in the immune system.
TS22: spleen primordium Weak Regionally restricted Embryo_C1617_5_6A
TS22: thymus primordium Moderate Regionally restricted Embryo_C1617_5_4A
TS22: appendicular skeleton Moderate Regionally restricted Embryo_C1617_5_5B Expression was detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Regionally restricted Embryo_C1617_5_5C
TS22: face Weak Regionally restricted Embryo_C1617_5_4A Expression was weak in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Weak Regionally restricted Embryo_C1617_5_4B
TS22: forelimb Weak Regionally restricted Embryo_C1617_5_1B
TS22: hindlimb Weak Regionally restricted Embryo_C1617_5_1C
TS22: integumental system Weak Regionally restricted Embryo_C1617_5_6C
TS22: skin Weak Regionally restricted Embryo_C1617_5_6C
TS22: hair Weak Regionally restricted Embryo_C1617_5_1C
TS22: vibrissa follicle Weak Regionally restricted Embryo_C1617_5_1C Expression was weak in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory