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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5422502
Gene symbol: Slc22a17
Gene name: solute carrier family 22 (organic cation transporter), member 17
Probe: T51031
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH2066; Specimen C2191: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C2191_1_6A
TS22: central nervous system Strong Regionally restricted Embryo_C2191_1_6A
TS22: telencephalon Strong Regionally restricted Embryo_C2191_1_6A
TS22: cerebral cortex Strong Regionally restricted Embryo_C2191_1_6A
TS22: neocortex Strong Regionally restricted Embryo_C2191_1_6A
TS22: olfactory cortex Strong Regionally restricted Embryo_C2191_1_6A
TS22: main olfactory bulb Strong Regionally restricted Embryo_C2191_1_6A
TS22: piriform cortex Strong Regionally restricted Embryo_C2191_1_2C
TS22: hippocampus Strong Regionally restricted Embryo_C2191_1_6A
TS22: basal ganglia Moderate Regionally restricted Embryo_C2191_1_2C
TS22: corpus striatum Weak Regionally restricted Embryo_C2191_1_2B Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Weak Regionally restricted Embryo_C2191_1_4B
TS22: amygdala Moderate Regionally restricted Embryo_C2191_1_2C
TS22: telencephalon septum Weak Regionally restricted Embryo_C2191_1_5C
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_C2191_1_4C
TS22: thalamus Strong Regionally restricted Embryo_C2191_1_4C
TS22: hypothalamus Strong Regionally restricted Embryo_C2191_1_4C
TS22: midbrain Strong Regionally restricted Embryo_C2191_1_3C
TS22: pretectum Strong Regionally restricted Embryo_C2191_1_5B
TS22: superior colliculus Strong Regionally restricted Embryo_C2191_1_3C
TS22: inferior colliculus Strong Regionally restricted Embryo_C2191_1_3C
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_C2191_1_4C
TS22: hindbrain Strong Regionally restricted Embryo_C2191_1_3D
TS22: cerebellum Weak Regionally restricted Embryo_C2191_1_3D
TS22: pons Moderate Regionally restricted Embryo_C2191_1_4C
TS22: medulla oblongata Strong Regionally restricted Embryo_C2191_1_3B
TS22: spinal cord Strong Regionally restricted Embryo_C2191_1_3A
TS22: choroid plexus Strong Regionally restricted Embryo_C2191_1_3A
TS22: meninges Moderate Regionally restricted Embryo_C2191_1_3A
TS22: peripheral nervous system Strong Regionally restricted Embryo_C2191_1_3A
TS22: cranial ganglion Strong Regionally restricted Embryo_C2191_1_3A
TS22: dorsal root ganglion Strong Regionally restricted Embryo_C2191_1_5A
TS22: eye Moderate Regionally restricted Embryo_C2191_1_1C
TS22: retina Moderate Regionally restricted Embryo_C2191_1_1C
TS22: lens Moderate Regionally restricted Embryo_C2191_1_1C
TS22: cornea Moderate Regionally restricted Embryo_C2191_1_1C
TS22: optic nerve Weak Regionally restricted Embryo_C2191_1_3C
TS22: nose Weak Regionally restricted Embryo_C2191_1_4A
TS22: olfactory epithelium Weak Regionally restricted Embryo_C2191_1_4A
TS22: ear Weak Regionally restricted Embryo_C2191_1_5D
TS22: inner ear Weak Regionally restricted Embryo_C2191_1_5D
TS22: cochlea Weak Regionally restricted Embryo_C2191_1_5D
TS22: inner ear labyrinth Weak Regionally restricted Embryo_C2191_1_1C
TS22: middle ear Weak Regionally restricted Embryo_C2191_1_1A
TS22: alimentary system Strong Regionally restricted Embryo_C2191_1_2B Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C2191_1_4A
TS22: salivary gland Weak Regionally restricted Embryo_C2191_1_3A
TS22: tongue Moderate Regionally restricted Embryo_C2191_1_4D
TS22: tooth Absent
TS22: palatal shelf Weak Regionally restricted Embryo_C2191_1_4D
TS22: esophagus Weak Regionally restricted Embryo_C2191_1_4A
TS22: stomach Strong Regionally restricted Embryo_C2191_1_2B
TS22: liver Absent
TS22: respiratory system Moderate Regionally restricted Embryo_C2191_1_2D
TS22: pharynx Absent
TS22: larynx Weak Regionally restricted Embryo_C2191_1_4C
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Moderate Regionally restricted Embryo_C2191_1_2D
TS22: urinary system Moderate Regionally restricted Embryo_C2191_1_6B Expression was detected in the genito-urinary system.
TS22: metanephros Moderate Regionally restricted Embryo_C2191_1_2D
TS22: ureter Weak Regionally restricted Embryo_C2191_1_4C
TS22: bladder Moderate Regionally restricted Embryo_C2191_1_4C
TS22: urethra Weak Regionally restricted Embryo_C2191_1_5D
TS22: reproductive system Moderate Regionally restricted Embryo_C2191_1_6B
TS22: genital tubercle Moderate Regionally restricted Embryo_C2191_1_5B
TS22: gonad Weak Regionally restricted Embryo_C2191_1_6B
TS22: gland Strong Regionally restricted Embryo_C2191_1_4C Expression was strong in the endocrine system.
TS22: thyroid gland Weak Regionally restricted Embryo_C2191_1_3D
TS22: pituitary gland Strong Regionally restricted Embryo_C2191_1_4C
TS22: pancreas Weak Regionally restricted Embryo_C2191_1_3B
TS22: adrenal gland Weak Regionally restricted Embryo_C2191_1_2D
TS22: cardiovascular system Weak Regionally restricted Embryo_C2191_1_3B
TS22: heart Weak Regionally restricted Embryo_C2191_1_3B
TS22: heart atrium Weak Regionally restricted Embryo_C2191_1_3B
TS22: heart ventricle Weak Regionally restricted Embryo_C2191_1_3B
TS22: blood vessel Weak Regionally restricted Embryo_C2191_1_4A
TS22: hemolymphoid system Weak Regionally restricted Embryo_C2191_1_3D Expression was weak in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Weak Regionally restricted Embryo_C2191_1_3D
TS22: appendicular skeleton Moderate Regionally restricted Embryo_C2191_1_2A Expression was detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Moderate Regionally restricted Embryo_C2191_1_2A
TS22: face Weak Regionally restricted Embryo_C2191_1_5A Expression was weak in the face/soft tissues.
TS22: facial bone primordium Weak Regionally restricted Embryo_C2191_1_5A
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Moderate Regionally restricted Embryo_C2191_1_2B
TS22: tail Moderate Regionally restricted Embryo_C2191_1_6A
TS22: forelimb Strong Regionally restricted Embryo_C2191_1_2A
TS22: hindlimb Strong Regionally restricted Embryo_C2191_1_3B
TS22: integumental system Strong Regionally restricted Embryo_C2191_1_3A
TS22: skin Strong Regionally restricted Embryo_C2191_1_3A
TS22: hair Moderate Regionally restricted Embryo_C2191_1_3B
TS22: vibrissa follicle Moderate Regionally restricted Embryo_C2191_1_3B Expression was detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory