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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421897
Gene symbol: Ndufb9
Gene name: NADH:ubiquinone oxidoreductase subunit B9
Probe: T31160
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EG1959; Specimen G0601: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Weak Regionally restricted Embryo_G0601_1_4C
TS22: central nervous system Weak Regionally restricted Embryo_G0601_1_4C
TS22: telencephalon Absent
TS22: cerebral cortex Absent
TS22: neocortex Absent
TS22: olfactory cortex Absent
TS22: main olfactory bulb Absent
TS22: piriform cortex Absent
TS22: hippocampus Absent
TS22: basal ganglia Absent
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Absent
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Absent
TS22: thalamus Absent
TS22: hypothalamus Absent
TS22: midbrain Weak Regionally restricted Embryo_G0601_1_4C
TS22: pretectum Absent
TS22: superior colliculus Absent
TS22: inferior colliculus Weak Ubiquitous Embryo_G0601_1_4C
TS22: midbrain tegmentum Absent
TS22: hindbrain Absent
TS22: cerebellum Absent
TS22: pons Absent
TS22: medulla oblongata Absent
TS22: spinal cord Weak Regionally restricted Embryo_G0601_1_3C
TS22: choroid plexus Weak Regionally restricted Embryo_G0601_1_3A
TS22: meninges Absent
TS22: peripheral nervous system Weak Ubiquitous Embryo_G0601_1_3A
TS22: cranial ganglion Weak Ubiquitous Embryo_G0601_1_2B
TS22: dorsal root ganglion Weak Ubiquitous Embryo_G0601_1_3A
TS22: eye Absent
TS22: retina Absent
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Weak Regionally restricted Embryo_G0601_1_1B Expression was weak in the digestive system.
TS22: intestine Weak Regionally restricted Embryo_G0601_1_3D
TS22: salivary gland Weak Ubiquitous Embryo_G0601_1_4C
TS22: tongue Absent
TS22: tooth Weak Ubiquitous Embryo_G0601_1_4A
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Weak Ubiquitous Embryo_G0601_1_1B
TS22: respiratory system Absent
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Absent
TS22: urinary system Weak Regionally restricted Embryo_G0601_1_3A Expression was weak in the genito-urinary system.
TS22: metanephros Weak Ubiquitous Embryo_G0601_1_3A
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Weak Regionally restricted Embryo_G0601_1_2C
TS22: genital tubercle Weak Regionally restricted Embryo_G0601_1_4C
TS22: gonad Weak Regionally restricted Embryo_G0601_1_2C
TS22: gland Weak Regionally restricted Embryo_G0601_1_3B Expression was weak in the endocrine system.
TS22: thyroid gland Weak Ubiquitous Embryo_G0601_1_4B
TS22: pituitary gland Absent
TS22: pancreas Weak Ubiquitous Embryo_G0601_1_3B
TS22: adrenal gland Weak Ubiquitous Embryo_G0601_1_3A
TS22: cardiovascular system Weak Regionally restricted Embryo_G0601_1_3D
TS22: heart Weak Regionally restricted Embryo_G0601_1_3D
TS22: heart atrium Absent
TS22: heart ventricle Weak Ubiquitous Embryo_G0601_1_3D
TS22: blood vessel Absent
TS22: hemolymphoid system Weak Regionally restricted Embryo_G0601_1_4B Expression was weak in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Weak Ubiquitous Embryo_G0601_1_4B
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Ubiquitous Embryo_G0601_1_1A
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Weak Regionally restricted Embryo_G0601_1_1C Expression was weak in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Absent
TS22: forelimb Weak Regionally restricted Embryo_G0601_1_1A
TS22: hindlimb Weak Regionally restricted Embryo_G0601_1_1A
TS22: integumental system Weak Regionally restricted Embryo_G0601_1_1A
TS22: skin Weak Regionally restricted Embryo_G0601_1_1A
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
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