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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421775
Gene symbol: Plxnb2
Gene name: plexin B2
Probe: ST51 probe 1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen ST51; Specimen C1053: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1053_4_3A
TS22: central nervous system Strong Regionally restricted Embryo_C1053_4_3A
TS22: telencephalon Moderate Regionally restricted Embryo_C1053_4_2B
TS22: cerebral cortex Moderate Regionally restricted Embryo_C1053_4_4B
TS22: neocortex Moderate Regionally restricted Embryo_C1053_4_2C
TS22: olfactory cortex Moderate Regionally restricted Embryo_C1053_4_4B
TS22: main olfactory bulb Moderate Regionally restricted Embryo_C1053_4_4B
TS22: piriform cortex Absent
TS22: hippocampus Moderate Regionally restricted Embryo_C1053_4_2A
TS22: basal ganglia Moderate Regionally restricted Embryo_C1053_4_2B
TS22: corpus striatum Weak Regionally restricted Embryo_C1053_4_1C Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Moderate Regionally restricted Embryo_C1053_4_3B
TS22: pallidum Moderate Regionally restricted Embryo_C1053_4_2B Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_C1053_4_3C
TS22: thalamus Strong Regionally restricted Embryo_C1053_4_3C
TS22: hypothalamus Moderate Regionally restricted Embryo_C1053_4_3B
TS22: midbrain Moderate Regionally restricted Embryo_C1053_4_3B
TS22: pretectum Absent
TS22: superior colliculus Moderate Regionally restricted Embryo_C1053_4_3B
TS22: inferior colliculus Weak Regionally restricted Embryo_C1053_4_3B
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_C1053_4_3B
TS22: hindbrain Strong Regionally restricted Embryo_C1053_4_3A
TS22: cerebellum Strong Regionally restricted Embryo_C1053_4_3A
TS22: pons Moderate Regionally restricted Embryo_C1053_4_3A
TS22: medulla oblongata Moderate Regionally restricted Embryo_C1053_4_3B
TS22: spinal cord Strong Regionally restricted Embryo_C1053_4_3C
TS22: choroid plexus Strong Regionally restricted Embryo_C1053_4_5A
TS22: meninges Absent
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Moderate Regionally restricted Embryo_C1053_4_1A
TS22: retina Moderate Regionally restricted Embryo_C1053_4_1A
TS22: optic nerve Absent
TS22: nose Strong Regionally restricted Embryo_C1053_4_4A
TS22: olfactory epithelium Strong Regionally restricted Embryo_C1053_4_4A
TS22: ear Moderate Regionally restricted Embryo_C1053_4_2C
TS22: inner ear Moderate Regionally restricted Embryo_C1053_4_2C
TS22: cochlea Moderate Regionally restricted Embryo_C1053_4_2C
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_C1053_4_2B
TS22: middle ear Weak Regionally restricted Embryo_C1053_4_5D
TS22: alimentary system Moderate Regionally restricted Embryo_C1053_4_4A Expression was detected in the digestive system.
TS22: intestine Weak Regionally restricted Embryo_C1053_4_3D
TS22: salivary gland Weak Regionally restricted Embryo_C1053_4_2C
TS22: tongue Absent
TS22: tooth Moderate Regionally restricted Embryo_C1053_4_4A
TS22: palatal shelf Weak Regionally restricted Embryo_C1053_4_3D
TS22: esophagus Moderate Regionally restricted Embryo_C1053_4_3B
TS22: stomach Moderate Regionally restricted Embryo_C1053_4_1B
TS22: liver Absent
TS22: respiratory system Moderate Regionally restricted Embryo_C1053_4_4C
TS22: pharynx Weak Regionally restricted Embryo_C1053_4_3C
TS22: larynx Weak Regionally restricted Embryo_C1053_4_3C
TS22: trachea Weak Regionally restricted Embryo_C1053_4_3C
TS22: main bronchus Weak Regionally restricted Embryo_C1053_4_3D
TS22: lung Moderate Regionally restricted Embryo_C1053_4_4C
TS22: urinary system Moderate Regionally restricted Embryo_C1053_4_3C Expression was detected in the genito-urinary system.
TS22: metanephros Moderate Regionally restricted Embryo_C1053_4_5A
TS22: ureter Weak Regionally restricted Embryo_C1053_4_3C
TS22: bladder Moderate Regionally restricted Embryo_C1053_4_3C
TS22: urethra Moderate Regionally restricted Embryo_C1053_4_3D
TS22: reproductive system Weak Regionally restricted Embryo_C1053_4_4A
TS22: genital tubercle Weak Regionally restricted Embryo_C1053_4_4A
TS22: gonad Absent
TS22: gland Strong Regionally restricted Embryo_C1053_4_3B Expression was strong in the endocrine system.
TS22: thyroid gland Weak Regionally restricted Embryo_C1053_4_3A
TS22: pituitary gland Strong Regionally restricted Embryo_C1053_4_3B
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Weak Regionally restricted Embryo_C1053_4_3A
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Weak Regionally restricted Embryo_C1053_4_3A
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Weak Regionally restricted Embryo_C1053_4_3C Expression was weak in the skull (base and vault).
TS22: axial skeleton Moderate Regionally restricted Embryo_C1053_4_1B
TS22: tail Weak Regionally restricted Embryo_C1053_4_4A
TS22: forelimb Absent
TS22: hindlimb Absent
TS22: integumental system Moderate Regionally restricted Embryo_C1053_4_5C
TS22: skin Weak Regionally restricted Embryo_C1053_4_5C
TS22: hair Moderate Regionally restricted Embryo_C1053_4_5C
TS22: vibrissa follicle Moderate Regionally restricted Embryo_C1053_4_5C Expression was detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
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