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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421728
Gene symbol: Fgfr4
Gene name: fibroblast growth factor receptor 4
Probe: FG37 probe 24
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen FG37; Specimen EX216: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_EX216_3_4B
TS22: central nervous system Strong Regionally restricted Embryo_EX216_3_4B
TS22: telencephalon Strong Regionally restricted Embryo_EX216_3_5D
TS22: cerebral cortex Strong Regionally restricted Embryo_EX216_3_5D
TS22: neocortex Moderate Regionally restricted Embryo_EX216_3_2A
TS22: olfactory cortex Absent
TS22: main olfactory bulb Absent
TS22: piriform cortex Absent
TS22: hippocampus Strong Regionally restricted Embryo_EX216_3_5D
TS22: basal ganglia Moderate Regionally restricted Embryo_EX216_3_1C
TS22: corpus striatum Moderate Regionally restricted Embryo_EX216_3_1C Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Moderate Regionally restricted Embryo_EX216_3_1C
TS22: telencephalon septum Weak Regionally restricted Embryo_EX216_3_4A
TS22: pallidum Moderate Regionally restricted Embryo_EX216_3_3A Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_EX216_3_3C
TS22: thalamus Moderate Regionally restricted Embryo_EX216_3_3B
TS22: hypothalamus Strong Regionally restricted Embryo_EX216_3_3C
TS22: midbrain Moderate Regionally restricted Embryo_EX216_3_4B
TS22: pretectum Weak Regionally restricted Embryo_EX216_3_4A
TS22: superior colliculus Moderate Regionally restricted Embryo_EX216_3_3C
TS22: inferior colliculus Weak Regionally restricted Embryo_EX216_3_2D
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_EX216_3_4B
TS22: hindbrain Strong Regionally restricted Embryo_EX216_3_2D
TS22: cerebellum Moderate Regionally restricted Embryo_EX216_3_4A
TS22: pons Strong Regionally restricted Embryo_EX216_3_2D
TS22: medulla oblongata Moderate Regionally restricted Embryo_EX216_3_3D
TS22: spinal cord Strong Regionally restricted Embryo_EX216_3_4B
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Weak Regionally restricted Embryo_EX216_3_1A
TS22: retina Absent
TS22: lens Weak Regionally restricted Embryo_EX216_3_1A
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Weak Regionally restricted Embryo_EX216_3_3B
TS22: olfactory epithelium Weak Regionally restricted Embryo_EX216_3_3B
TS22: ear Strong Regionally restricted Embryo_EX216_3_3A
TS22: inner ear Strong Regionally restricted Embryo_EX216_3_3A
TS22: cochlea Strong Regionally restricted Embryo_EX216_3_3A
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_EX216_3_6B
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_EX216_3_4B Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_EX216_3_4B
TS22: salivary gland Absent
TS22: tongue Moderate Regionally restricted Embryo_EX216_3_3C
TS22: tooth Absent
TS22: palatal shelf Weak Regionally restricted Embryo_EX216_3_3A
TS22: esophagus Weak Regionally restricted Embryo_EX216_3_3D
TS22: stomach Moderate Regionally restricted Embryo_EX216_3_2B
TS22: liver Weak Regionally restricted Embryo_EX216_3_3A
TS22: respiratory system Strong Regionally restricted Embryo_EX216_3_3D
TS22: pharynx Weak Regionally restricted Embryo_EX216_3_3D
TS22: larynx Weak Regionally restricted Embryo_EX216_3_3D
TS22: trachea Strong Regionally restricted Embryo_EX216_3_3D
TS22: main bronchus Absent
TS22: lung Moderate Regionally restricted Embryo_EX216_3_3A
TS22: urinary system Moderate Regionally restricted Embryo_EX216_3_3B Expression was detected in the genito-urinary system.
TS22: metanephros Moderate Regionally restricted Embryo_EX216_3_3B
TS22: ureter Weak Regionally restricted Embryo_EX216_3_4B
TS22: bladder Weak Regionally restricted Embryo_EX216_3_4B
TS22: urethra Weak Regionally restricted Embryo_EX216_3_4B
TS22: reproductive system Moderate Regionally restricted Embryo_EX216_3_3C
TS22: genital tubercle Moderate Regionally restricted Embryo_EX216_3_3C
TS22: gonad Absent
TS22: gland Strong Regionally restricted Embryo_EX216_3_3B Expression was strong in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Strong Regionally restricted Embryo_EX216_3_3B
TS22: adrenal gland Weak Regionally restricted Embryo_EX216_3_3A
TS22: cardiovascular system Weak Regionally restricted Embryo_EX216_3_3C
TS22: heart Weak Regionally restricted Embryo_EX216_3_3C
TS22: heart atrium Absent
TS22: heart ventricle Weak Regionally restricted Embryo_EX216_3_3C
TS22: blood vessel Absent
TS22: hemolymphoid system Weak Regionally restricted Embryo_EX216_3_2A Expression was weak in the immune system.
TS22: spleen primordium Weak Regionally restricted Embryo_EX216_3_2A
TS22: thymus primordium Absent
TS22: appendicular skeleton Weak Regionally restricted Embryo_EX216_3_6B Expression was weak in the skeleton (limbs, shoulder, hip).
TS22: musculature Strong Regionally restricted Embryo_EX216_3_1B
TS22: face Moderate Regionally restricted Embryo_EX216_3_4A Expression was detected in the face/soft tissues.
TS22: facial bone primordium Moderate Regionally restricted Embryo_EX216_3_4A
TS22: cranium Moderate Regionally restricted Embryo_EX216_3_4A Expression was detected in the skull (base and vault).
TS22: axial skeleton Moderate Regionally restricted Embryo_EX216_3_6B
TS22: tail Strong Regionally restricted Embryo_EX216_3_4B
TS22: forelimb Strong Regionally restricted Embryo_EX216_3_1D
TS22: hindlimb Strong Regionally restricted Embryo_EX216_3_1C
TS22: integumental system Weak Regionally restricted Embryo_EX216_3_6A
TS22: skin Absent
TS22: hair Weak Regionally restricted Embryo_EX216_3_6A
TS22: vibrissa follicle Weak Regionally restricted Embryo_EX216_3_6A Expression was weak in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
MGI 6.23 		The Jackson Laboratory