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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421659
Gene symbol: Pdk1
Gene name: pyruvate dehydrogenase kinase, isoenzyme 1
Probe: MH1723 probe 1394
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH1723; Specimen C1824: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Moderate Regionally restricted Embryo_C1824_6_3B
TS22: central nervous system Moderate Regionally restricted Embryo_C1824_6_3B
TS22: telencephalon Weak Regionally restricted Embryo_C1824_6_3B
TS22: cerebral cortex Weak Regionally restricted Embryo_C1824_6_2B
TS22: neocortex Weak Regionally restricted Embryo_C1824_6_2C
TS22: olfactory cortex Absent
TS22: main olfactory bulb Absent
TS22: piriform cortex Absent
TS22: hippocampus Weak Regionally restricted Embryo_C1824_6_2B
TS22: basal ganglia Weak Regionally restricted Embryo_C1824_6_3B
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Weak Regionally restricted Embryo_C1824_6_3B
TS22: pallidum Weak Regionally restricted Embryo_C1824_6_3B Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Absent
TS22: thalamus Absent
TS22: hypothalamus Absent
TS22: midbrain Absent
TS22: pretectum Absent
TS22: superior colliculus Absent
TS22: inferior colliculus Absent
TS22: midbrain tegmentum Absent
TS22: hindbrain Moderate Regionally restricted Embryo_C1824_6_3B
TS22: cerebellum Moderate Regionally restricted Embryo_C1824_6_3B
TS22: pons Weak Regionally restricted Embryo_C1824_6_2B
TS22: medulla oblongata Absent
TS22: spinal cord Weak Regionally restricted Embryo_C1824_6_3B
TS22: choroid plexus Weak Regionally restricted Embryo_C1824_6_2D
TS22: meninges Absent
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Moderate Regionally restricted Embryo_C1824_6_1A
TS22: retina Moderate Regionally restricted Embryo_C1824_6_1A
TS22: lens Moderate Regionally restricted Embryo_C1824_6_1A
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Moderate Regionally restricted Embryo_C1824_6_3B
TS22: olfactory epithelium Moderate Regionally restricted Embryo_C1824_6_3B
TS22: ear Strong Regionally restricted Embryo_C1824_6_2C
TS22: inner ear Moderate Regionally restricted Embryo_C1824_6_2C
TS22: cochlea Moderate Regionally restricted Embryo_C1824_6_2C
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_C1824_6_5A
TS22: middle ear Strong Regionally restricted Embryo_C1824_6_1B
TS22: alimentary system Strong Regionally restricted Embryo_C1824_6_2C Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_C1824_6_4D
TS22: salivary gland Strong Regionally restricted Embryo_C1824_6_2C
TS22: tongue Absent
TS22: tooth Moderate Regionally restricted Embryo_C1824_6_4A
TS22: palatal shelf Moderate Regionally restricted Embryo_C1824_6_4B
TS22: esophagus Moderate Regionally restricted Embryo_C1824_6_3C
TS22: stomach Moderate Regionally restricted Embryo_C1824_6_1C
TS22: liver Moderate Ubiquitous Embryo_C1824_6_5C
TS22: respiratory system Strong Regionally restricted Embryo_C1824_6_5B
TS22: pharynx Weak Regionally restricted Embryo_C1824_6_4B
TS22: larynx Weak Regionally restricted Embryo_C1824_6_4B
TS22: trachea Moderate Regionally restricted Embryo_C1824_6_3C
TS22: main bronchus Absent
TS22: lung Strong Regionally restricted Embryo_C1824_6_5B
TS22: urinary system Moderate Regionally restricted Embryo_C1824_6_4C Expression was detected in the genito-urinary system.
TS22: metanephros Moderate Regionally restricted Embryo_C1824_6_5C
TS22: ureter Weak Regionally restricted Embryo_C1824_6_4C
TS22: bladder Moderate Regionally restricted Embryo_C1824_6_4C
TS22: urethra Absent
TS22: reproductive system Moderate Regionally restricted Embryo_C1824_6_4C
TS22: genital tubercle Moderate Regionally restricted Embryo_C1824_6_4C
TS22: gonad Weak Regionally restricted Embryo_C1824_6_6B
TS22: gland Weak Regionally restricted Embryo_C1824_6_3C Expression was weak in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Weak Regionally restricted Embryo_C1824_6_3B
TS22: pancreas Weak Regionally restricted Embryo_C1824_6_3C
TS22: adrenal gland Weak Regionally restricted Embryo_C1824_6_5B
TS22: cardiovascular system Moderate Regionally restricted Embryo_C1824_6_3B
TS22: heart Moderate Regionally restricted Embryo_C1824_6_3B
TS22: heart atrium Moderate Regionally restricted Embryo_C1824_6_3C
TS22: heart ventricle Moderate Regionally restricted Embryo_C1824_6_3B
TS22: blood vessel Moderate Regionally restricted Embryo_C1824_6_3B
TS22: hemolymphoid system Moderate Regionally restricted Embryo_C1824_6_4B Expression was detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Moderate Ubiquitous Embryo_C1824_6_4B
TS22: appendicular skeleton Weak Regionally restricted Embryo_C1824_6_4B Expression was weak in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Regionally restricted Embryo_C1824_6_2D
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Weak Regionally restricted Embryo_C1824_6_4B
TS22: cranium Weak Regionally restricted Embryo_C1824_6_4B Expression was weak in the skull (base and vault).
TS22: axial skeleton Weak Regionally restricted Embryo_C1824_6_5B
TS22: tail Strong Regionally restricted Embryo_C1824_6_5B
TS22: forelimb Moderate Regionally restricted Embryo_C1824_6_1B
TS22: hindlimb Strong Regionally restricted Embryo_C1824_6_6D
TS22: integumental system Moderate Regionally restricted Embryo_C1824_6_1B
TS22: skin Moderate Regionally restricted Embryo_C1824_6_4B
TS22: hair Moderate Regionally restricted Embryo_C1824_6_2D
TS22: vibrissa follicle Moderate Regionally restricted Embryo_C1824_6_2D Expression was detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory