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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421558
Gene symbol: Pnpo
Gene name: pyridoxine 5'-phosphate oxidase
Probe: MH1502 probe 1214
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH1502; Specimen C1524: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1524_3_5A
TS22: central nervous system Strong Regionally restricted Embryo_C1524_3_5A
TS22: telencephalon Strong Scattered Embryo_C1524_3_5A
TS22: cerebral cortex Strong Scattered Embryo_C1524_3_5A
TS22: neocortex Strong Scattered Embryo_C1524_3_5A
TS22: olfactory cortex Moderate Scattered Embryo_C1524_3_3A
TS22: main olfactory bulb Moderate Scattered Embryo_C1524_3_3A
TS22: piriform cortex Moderate Scattered Embryo_C1524_3_1D
TS22: hippocampus Strong Scattered Embryo_C1524_3_6B
TS22: basal ganglia Strong Scattered Embryo_C1524_3_3B
TS22: corpus striatum Strong Scattered Embryo_C1524_3_2A Expression was strong in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Moderate Scattered Embryo_C1524_3_3A
TS22: amygdala Moderate Scattered Embryo_C1524_3_1C
TS22: telencephalon septum Strong Scattered Embryo_C1524_3_3B
TS22: pallidum Strong Scattered Embryo_C1524_3_3B Expression was strong in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Scattered Embryo_C1524_3_2C
TS22: thalamus Strong Scattered Embryo_C1524_3_2C
TS22: hypothalamus Strong Scattered Embryo_C1524_3_4B
TS22: midbrain Strong Scattered Embryo_C1524_3_4A
TS22: pretectum Strong Scattered Embryo_C1524_3_4B
TS22: superior colliculus Strong Scattered Embryo_C1524_3_4A
TS22: inferior colliculus Strong Scattered Embryo_C1524_3_4A
TS22: midbrain tegmentum Strong Scattered Embryo_C1524_3_3B
TS22: hindbrain Strong Scattered Embryo_C1524_3_3A
TS22: cerebellum Strong Scattered Embryo_C1524_3_4A
TS22: pons Strong Scattered Embryo_C1524_3_3A
TS22: medulla oblongata Strong Scattered Embryo_C1524_3_5B
TS22: spinal cord Strong Scattered Embryo_C1524_3_3C
TS22: choroid plexus Strong Regionally restricted Embryo_C1524_3_4A
TS22: meninges Absent
TS22: peripheral nervous system Strong Scattered Embryo_C1524_3_2A
TS22: cranial ganglion Strong Scattered Embryo_C1524_3_2A
TS22: dorsal root ganglion Moderate Scattered Embryo_C1524_3_3A
TS22: eye Moderate Scattered Embryo_C1524_3_1B
TS22: retina Moderate Scattered Embryo_C1524_3_1B
TS22: lens Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Strong Scattered Embryo_C1524_3_5A
TS22: inner ear Strong Scattered Embryo_C1524_3_5A
TS22: cochlea Strong Scattered Embryo_C1524_3_5A
TS22: inner ear labyrinth Strong Scattered Embryo_C1524_3_2A
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_C1524_3_4B Expression was strong in the digestive system.
TS22: intestine Strong Scattered Embryo_C1524_3_4A
TS22: salivary gland Moderate Scattered Embryo_C1524_3_5A
TS22: tongue Strong Scattered Embryo_C1524_3_4B
TS22: tooth Strong Scattered Embryo_C1524_3_4B
TS22: palatal shelf Moderate Scattered Embryo_C1524_3_3B
TS22: esophagus Strong Scattered Embryo_C1524_3_4B
TS22: stomach Moderate Scattered Embryo_C1524_3_6A
TS22: liver Strong Regionally restricted Embryo_C1524_3_6A
TS22: respiratory system Strong Regionally restricted Embryo_C1524_3_5A
TS22: pharynx Absent
TS22: larynx Weak Regionally restricted Embryo_C1524_3_4A
TS22: trachea Weak Scattered Embryo_C1524_3_3D
TS22: main bronchus Weak Scattered Embryo_C1524_3_5A
TS22: lung Strong Scattered Embryo_C1524_3_5A
TS22: urinary system Strong Regionally restricted Embryo_C1524_3_4B Expression was strong in the genito-urinary system.
TS22: metanephros Moderate Scattered Embryo_C1524_3_3A
TS22: ureter Absent
TS22: bladder Moderate Scattered Embryo_C1524_3_4A
TS22: urethra Absent
TS22: reproductive system Strong Scattered Embryo_C1524_3_4B
TS22: genital tubercle Strong Scattered Embryo_C1524_3_4B
TS22: gonad Moderate Scattered Embryo_C1524_3_6B
TS22: gland Strong Regionally restricted Embryo_C1524_3_3C Expression was strong in the endocrine system.
TS22: thyroid gland Strong Scattered Embryo_C1524_3_4C
TS22: pituitary gland Strong Regionally restricted Embryo_C1524_3_3C
TS22: pancreas Moderate Scattered Embryo_C1524_3_5C
TS22: adrenal gland Moderate Scattered Embryo_C1524_3_3A
TS22: cardiovascular system Moderate Scattered Embryo_C1524_3_4A
TS22: heart Moderate Scattered Embryo_C1524_3_4A
TS22: heart atrium Moderate Scattered Embryo_C1524_3_3A
TS22: heart ventricle Moderate Scattered Embryo_C1524_3_4A
TS22: blood vessel Moderate Scattered Embryo_C1524_3_4C
TS22: hemolymphoid system Strong Scattered Embryo_C1524_3_6A Expression was strong in the immune system.
TS22: spleen primordium Strong Scattered Embryo_C1524_3_6A
TS22: thymus primordium Moderate Scattered Embryo_C1524_3_4A
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Moderate Scattered Embryo_C1524_3_6B
TS22: face Moderate Scattered Embryo_C1524_3_4B Expression was detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Strong Scattered Embryo_C1524_3_3B
TS22: forelimb Moderate Scattered Embryo_C1524_3_1B
TS22: hindlimb Moderate Scattered Embryo_C1524_3_1B
TS22: integumental system Absent
TS22: skin Absent
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory