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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421238
Gene symbol: Lef1
Gene name: lymphoid enhancer binding factor 1
Probe: MH764 probe 635
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH764; Specimen C1238: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1238_1_3D
TS22: central nervous system Strong Regionally restricted Embryo_C1238_1_3D
TS22: telencephalon Moderate Regionally restricted Embryo_C1238_1_2D
TS22: cerebral cortex Weak Regionally restricted Embryo_C1238_1_2D
TS22: neocortex Weak Regionally restricted Embryo_C1238_1_2D
TS22: olfactory cortex Absent
TS22: main olfactory bulb Absent
TS22: piriform cortex Absent
TS22: hippocampus Moderate Regionally restricted Embryo_C1238_1_3C
TS22: basal ganglia Absent
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Absent
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_C1238_1_3D
TS22: thalamus Moderate Regionally restricted Embryo_C1238_1_3D
TS22: hypothalamus Strong Regionally restricted Embryo_C1238_1_3D
TS22: midbrain Strong Regionally restricted Embryo_C1238_1_4A
TS22: pretectum Moderate Regionally restricted Embryo_C1238_1_4C
TS22: superior colliculus Strong Regionally restricted Embryo_C1238_1_4A
TS22: inferior colliculus Strong Regionally restricted Embryo_C1238_1_4A
TS22: midbrain tegmentum Weak Regionally restricted Embryo_C1238_1_4C
TS22: hindbrain Strong Regionally restricted Embryo_C1238_1_5A
TS22: cerebellum Strong Regionally restricted Embryo_C1238_1_5A
TS22: pons Absent
TS22: medulla oblongata Absent
TS22: spinal cord Absent
TS22: choroid plexus Weak Regionally restricted Embryo_C1238_1_3A
TS22: meninges Moderate Regionally restricted Embryo_C1238_1_3B
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Weak Regionally restricted Embryo_C1238_1_2D
TS22: retina Absent
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Weak Regionally restricted Embryo_C1238_1_2D
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Moderate Regionally restricted Embryo_C1238_1_3B
TS22: inner ear Moderate Regionally restricted Embryo_C1238_1_3B
TS22: cochlea Moderate Regionally restricted Embryo_C1238_1_3B
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_C1238_1_2C
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_C1238_1_4C Expression was strong in the digestive system.
TS22: intestine Absent
TS22: salivary gland Absent
TS22: tongue Weak Regionally restricted Embryo_C1238_1_4C
TS22: tooth Strong Regionally restricted Embryo_C1238_1_4C
TS22: palatal shelf Moderate Regionally restricted Embryo_C1238_1_5D
TS22: esophagus Absent
TS22: stomach Weak Regionally restricted Embryo_C1238_1_6B
TS22: liver Moderate Scattered Embryo_C1238_1_3A
TS22: respiratory system Moderate Regionally restricted Embryo_C1238_1_2C
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Moderate Regionally restricted Embryo_C1238_1_2C
TS22: urinary system Strong Regionally restricted Embryo_C1238_1_2D Expression was strong in the genito-urinary system.
TS22: metanephros Strong Regionally restricted Embryo_C1238_1_2D
TS22: ureter Moderate Regionally restricted Embryo_C1238_1_3C
TS22: bladder Moderate Regionally restricted Embryo_C1238_1_3D
TS22: urethra Moderate Regionally restricted Embryo_C1238_1_3D
TS22: reproductive system Moderate Regionally restricted Embryo_C1238_1_4B
TS22: genital tubercle Moderate Regionally restricted Embryo_C1238_1_4B
TS22: gonad Weak Regionally restricted Embryo_C1238_1_5B
TS22: gland Weak Regionally restricted Embryo_C1238_1_4D Expression was weak in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Weak Regionally restricted Embryo_C1238_1_4D
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Strong Regionally restricted Embryo_C1238_1_3D
TS22: heart Strong Regionally restricted Embryo_C1238_1_3D
TS22: heart atrium Strong Regionally restricted Embryo_C1238_1_3D
TS22: heart ventricle Strong Regionally restricted Embryo_C1238_1_3D
TS22: blood vessel Moderate Regionally restricted Embryo_C1238_1_3D
TS22: hemolymphoid system Strong Regionally restricted Embryo_C1238_1_4C Expression was strong in the immune system.
TS22: thymus primordium Strong Regionally restricted Embryo_C1238_1_4C
TS22: appendicular skeleton Moderate Regionally restricted Embryo_C1238_1_1B Expression was detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Moderate Regionally restricted Embryo_C1238_1_4A Expression was detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Moderate Regionally restricted Embryo_C1238_1_2D
TS22: tail Moderate Regionally restricted Embryo_C1238_1_3D
TS22: forelimb Moderate Regionally restricted Embryo_C1238_1_1A
TS22: hindlimb Moderate Regionally restricted Embryo_C1238_1_1B
TS22: integumental system Strong Regionally restricted Embryo_C1238_1_5A
TS22: skin Strong Regionally restricted Embryo_C1238_1_5A
TS22: hair Strong Regionally restricted Embryo_C1238_1_2A
TS22: vibrissa follicle Strong Regionally restricted Embryo_C1238_1_2A Expression was strong in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory