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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421013
Gene symbol: Mmp15
Gene name: matrix metallopeptidase 15
Probe: MH408 probe 239
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH408; Specimen C1082: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1082_7_3D
TS22: central nervous system Strong Regionally restricted Embryo_C1082_7_3D
TS22: telencephalon Moderate Regionally restricted Embryo_C1082_7_3A
TS22: cerebral cortex Moderate Regionally restricted Embryo_C1082_7_3A
TS22: neocortex Moderate Regionally restricted Embryo_C1082_7_3A
TS22: olfactory cortex Weak Regionally restricted Embryo_C1082_7_3A
TS22: main olfactory bulb Weak Regionally restricted Embryo_C1082_7_3A
TS22: piriform cortex Absent
TS22: hippocampus Moderate Regionally restricted Embryo_C1082_7_1D
TS22: basal ganglia Moderate Regionally restricted Embryo_C1082_7_1B
TS22: corpus striatum Moderate Regionally restricted Embryo_C1082_7_1B Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Weak Regionally restricted Embryo_C1082_7_3A
TS22: amygdala Weak Scattered Embryo_C1082_7_1A
TS22: telencephalon septum Moderate Regionally restricted Embryo_C1082_7_3D
TS22: pallidum Weak Scattered Embryo_C1082_7_3A Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_C1082_7_3D
TS22: thalamus Strong Regionally restricted Embryo_C1082_7_3D
TS22: hypothalamus Moderate Regionally restricted Embryo_C1082_7_3D
TS22: midbrain Strong Regionally restricted Embryo_C1082_7_4A
TS22: pretectum Absent
TS22: superior colliculus Moderate Regionally restricted Embryo_C1082_7_4A
TS22: inferior colliculus Strong Regionally restricted Embryo_C1082_7_3A
TS22: midbrain tegmentum Strong Regionally restricted Embryo_C1082_7_4A
TS22: hindbrain Strong Regionally restricted Embryo_C1082_7_3D
TS22: cerebellum Strong Regionally restricted Embryo_C1082_7_2C
TS22: pons Strong Regionally restricted Embryo_C1082_7_3D
TS22: medulla oblongata Strong Regionally restricted Embryo_C1082_7_3D
TS22: spinal cord Strong Regionally restricted Embryo_C1082_7_3C
TS22: choroid plexus Moderate Regionally restricted Embryo_C1082_7_3A
TS22: meninges Absent
TS22: peripheral nervous system Strong Regionally restricted Embryo_C1082_7_2C
TS22: cranial ganglion Strong Regionally restricted Embryo_C1082_7_1C
TS22: dorsal root ganglion Strong Regionally restricted Embryo_C1082_7_2C
TS22: eye Moderate Regionally restricted Embryo_C1082_7_1B
TS22: retina Moderate Regionally restricted Embryo_C1082_7_1B
TS22: lens Absent
TS22: optic nerve Weak Regionally restricted Embryo_C1082_7_2D
TS22: nose Strong Regionally restricted Embryo_C1082_7_2C
TS22: olfactory epithelium Strong Regionally restricted Embryo_C1082_7_2C
TS22: ear Moderate Regionally restricted Embryo_C1082_7_2B
TS22: inner ear Moderate Regionally restricted Embryo_C1082_7_2B
TS22: cochlea Moderate Regionally restricted Embryo_C1082_7_2B
TS22: inner ear labyrinth Weak Regionally restricted Embryo_C1082_7_1C
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_C1082_7_4A Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_C1082_7_4A
TS22: salivary gland Moderate Regionally restricted Embryo_C1082_7_4D
TS22: tongue Moderate Regionally restricted Embryo_C1082_7_4A
TS22: tooth Absent
TS22: palatal shelf Moderate Regionally restricted Embryo_C1082_7_4D
TS22: esophagus Moderate Regionally restricted Embryo_C1082_7_3C
TS22: stomach Strong Regionally restricted Embryo_C1082_7_1A
TS22: liver Weak Scattered Embryo_C1082_7_4B
TS22: respiratory system Strong Regionally restricted Embryo_C1082_7_4A
TS22: pharynx Weak Regionally restricted Embryo_C1082_7_3D
TS22: larynx Weak Regionally restricted Embryo_C1082_7_3D
TS22: trachea Moderate Regionally restricted Embryo_C1082_7_3D
TS22: main bronchus Moderate Regionally restricted Embryo_C1082_7_4A
TS22: lung Strong Regionally restricted Embryo_C1082_7_4A
TS22: urinary system Moderate Regionally restricted Embryo_C1082_7_4B Expression was detected in the genito-urinary system.
TS22: metanephros Moderate Regionally restricted Embryo_C1082_7_4B
TS22: ureter Absent
TS22: bladder Moderate Regionally restricted Embryo_C1082_7_3B
TS22: urethra Moderate Regionally restricted Embryo_C1082_7_3C
TS22: reproductive system Moderate Regionally restricted Embryo_C1082_7_3D
TS22: genital tubercle Moderate Regionally restricted Embryo_C1082_7_3D
TS22: gonad Weak Regionally restricted Embryo_C1082_7_5A
TS22: gland Weak Regionally restricted Embryo_C1082_7_4B Expression was weak in the endocrine system.
TS22: thyroid gland Weak Regionally restricted Embryo_C1082_7_3B
TS22: pituitary gland Weak Regionally restricted Embryo_C1082_7_3C
TS22: pancreas Weak Regionally restricted Embryo_C1082_7_2C
TS22: adrenal gland Weak Regionally restricted Embryo_C1082_7_4B
TS22: cardiovascular system Moderate Regionally restricted Embryo_C1082_7_4A
TS22: heart Moderate Regionally restricted Embryo_C1082_7_4A
TS22: heart atrium Moderate Regionally restricted Embryo_C1082_7_2B
TS22: heart ventricle Moderate Regionally restricted Embryo_C1082_7_4A
TS22: blood vessel Absent
TS22: hemolymphoid system Weak Regionally restricted Embryo_C1082_7_3B Expression was weak in the immune system.
TS22: spleen primordium Weak Regionally restricted Embryo_C1082_7_1B
TS22: thymus primordium Weak Regionally restricted Embryo_C1082_7_3B
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Moderate Regionally restricted Embryo_C1082_7_2A
TS22: face Strong Regionally restricted Embryo_C1082_7_1C Expression was strong in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Strong Regionally restricted Embryo_C1082_7_2D
TS22: forelimb Moderate Regionally restricted Embryo_C1082_7_1A
TS22: hindlimb Moderate Regionally restricted Embryo_C1082_7_5B
TS22: integumental system Weak Regionally restricted Embryo_C1082_7_1D
TS22: skin Absent
TS22: hair Weak Regionally restricted Embryo_C1082_7_1D
TS22: vibrissa follicle Weak Regionally restricted Embryo_C1082_7_1D Expression was weak in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory