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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5420958
Gene symbol: Slc38a10
Gene name: solute carrier family 38, member 10
Probe: EG606 probe 655
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EG606; Specimen G0289: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_G0289_5_4D
TS22: central nervous system Strong Regionally restricted Embryo_G0289_5_4B
TS22: telencephalon Weak Scattered Embryo_G0289_5_4C
TS22: cerebral cortex Weak Scattered Embryo_G0289_5_4C
TS22: neocortex Weak Scattered Embryo_G0289_5_3A
TS22: olfactory cortex Weak Scattered Embryo_G0289_5_4C
TS22: main olfactory bulb Weak Scattered Embryo_G0289_5_4C
TS22: piriform cortex Weak Scattered Embryo_G0289_5_5C
TS22: hippocampus Weak Scattered Embryo_G0289_5_4D
TS22: basal ganglia Weak Scattered Embryo_G0289_5_4D
TS22: corpus striatum Weak Scattered Embryo_G0289_5_4D Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Weak Scattered Embryo_G0289_5_5C
TS22: amygdala Weak Scattered Embryo_G0289_5_5B
TS22: telencephalon septum Weak Scattered Embryo_G0289_5_5A
TS22: pallidum Weak Scattered Embryo_G0289_5_4D Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Scattered Embryo_G0289_5_4D
TS22: thalamus Weak Scattered Embryo_G0289_5_4D
TS22: hypothalamus Weak Scattered Embryo_G0289_5_4D
TS22: midbrain Weak Scattered Embryo_G0289_5_4B
TS22: pretectum Weak Scattered Embryo_G0289_5_4D
TS22: superior colliculus Weak Scattered Embryo_G0289_5_4B
TS22: inferior colliculus Weak Scattered Embryo_G0289_5_4B
TS22: midbrain tegmentum Weak Scattered Embryo_G0289_5_4B
TS22: hindbrain Moderate Scattered Embryo_G0289_5_4B
TS22: cerebellum Moderate Scattered Embryo_G0289_5_4B
TS22: pons Weak Scattered Embryo_G0289_5_4B
TS22: medulla oblongata Weak Scattered Embryo_G0289_5_4B
TS22: spinal cord Strong Regionally restricted Embryo_G0289_5_4B
TS22: choroid plexus Moderate Scattered Embryo_G0289_5_4B
TS22: meninges Weak Scattered Embryo_G0289_5_5B
TS22: peripheral nervous system Strong Scattered Embryo_G0289_5_4D
TS22: cranial ganglion Strong Scattered Embryo_G0289_5_2D
TS22: dorsal root ganglion Strong Scattered Embryo_G0289_5_4D
TS22: eye Weak Scattered Embryo_G0289_5_1A
TS22: retina Weak Scattered Embryo_G0289_5_1A
TS22: lens Weak Scattered Embryo_G0289_5_1A
TS22: cornea Weak Scattered Embryo_G0289_5_1A
TS22: optic nerve Weak Scattered Embryo_G0289_5_1A
TS22: nose Strong Scattered Embryo_G0289_5_4D
TS22: olfactory epithelium Strong Scattered Embryo_G0289_5_4D
TS22: ear Moderate Scattered Embryo_G0289_5_2D
TS22: inner ear Moderate Scattered Embryo_G0289_5_2D
TS22: cochlea Moderate Scattered Embryo_G0289_5_2D
TS22: inner ear labyrinth Moderate Scattered Embryo_G0289_5_2B
TS22: middle ear Moderate Scattered Embryo_G0289_5_1D
TS22: alimentary system Strong Regionally restricted Embryo_G0289_5_3C Expression was strong in the digestive system.
TS22: intestine Strong Scattered Embryo_G0289_5_4A
TS22: salivary gland Absent
TS22: tongue Weak Scattered Embryo_G0289_5_3C
TS22: tooth Weak Scattered Embryo_G0289_5_3C
TS22: palatal shelf Weak Scattered Embryo_G0289_5_3C
TS22: esophagus Moderate Scattered Embryo_G0289_5_3D
TS22: stomach Strong Scattered Embryo_G0289_5_2B
TS22: liver Weak Scattered Embryo_G0289_5_5D
TS22: respiratory system Strong Scattered Embryo_G0289_5_4B
TS22: pharynx Moderate Scattered Embryo_G0289_5_3D
TS22: larynx Moderate Scattered Embryo_G0289_5_3D
TS22: trachea Moderate Scattered Embryo_G0289_5_3D
TS22: main bronchus Strong Scattered Embryo_G0289_5_3A
TS22: lung Strong Scattered Embryo_G0289_5_4B
TS22: urinary system Strong Regionally restricted Embryo_G0289_5_5A Expression was strong in the genito-urinary system.
TS22: metanephros Strong Scattered Embryo_G0289_5_5A
TS22: ureter Weak Scattered Embryo_G0289_5_4A
TS22: bladder Moderate Scattered Embryo_G0289_5_4A
TS22: urethra Weak Scattered Embryo_G0289_5_4A
TS22: reproductive system Moderate Scattered Embryo_G0289_5_4A
TS22: genital tubercle Moderate Scattered Embryo_G0289_5_4A
TS22: gland Strong Scattered Embryo_G0289_5_3A Expression was strong in the endocrine system.
TS22: thyroid gland Strong Scattered Embryo_G0289_5_4C
TS22: pituitary gland Weak Scattered Embryo_G0289_5_3C
TS22: pancreas Strong Scattered Embryo_G0289_5_3A
TS22: adrenal gland Weak Scattered Embryo_G0289_5_5A
TS22: cardiovascular system Weak Scattered Embryo_G0289_5_3C
TS22: heart Weak Scattered Embryo_G0289_5_3C
TS22: heart atrium Weak Scattered Embryo_G0289_5_3C
TS22: heart ventricle Weak Scattered Embryo_G0289_5_3C
TS22: blood vessel Weak Scattered Embryo_G0289_5_3C
TS22: hemolymphoid system Strong Scattered Embryo_G0289_5_3D Expression was strong in the immune system.
TS22: spleen primordium Moderate Scattered Embryo_G0289_5_1D
TS22: thymus primordium Strong Scattered Embryo_G0289_5_3D
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Scattered Embryo_G0289_5_2B
TS22: face Weak Scattered Embryo_G0289_5_2B Expression was weak in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Strong Scattered Embryo_G0289_5_2B
TS22: tail Moderate Scattered Embryo_G0289_5_4A
TS22: forelimb Moderate Scattered Embryo_G0289_5_2B
TS22: hindlimb Moderate Scattered Embryo_G0289_5_2B
TS22: integumental system Moderate Regionally restricted Embryo_G0289_5_2B
TS22: skin Moderate Regionally restricted Embryo_G0289_5_2B
TS22: hair Weak Scattered Embryo_G0289_5_2B
TS22: vibrissa follicle Weak Scattered Embryo_G0289_5_2B Expression was weak in whisker follicle.
Specimen MH3099; Specimen C4216: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C4216_6_4B
TS22: central nervous system Strong Regionally restricted Embryo_C4216_6_4B
TS22: telencephalon Moderate Regionally restricted Embryo_C4216_6_3D
TS22: cerebral cortex Moderate Regionally restricted Embryo_C4216_6_3D
TS22: neocortex Moderate Regionally restricted Embryo_C4216_6_3D
TS22: olfactory cortex Moderate Regionally restricted Embryo_C4216_6_3D
TS22: main olfactory bulb Moderate Regionally restricted Embryo_C4216_6_3C
TS22: piriform cortex Absent
TS22: hippocampus Moderate Regionally restricted Embryo_C4216_6_3D
TS22: basal ganglia Moderate Regionally restricted Embryo_C4216_6_3D
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Moderate Regionally restricted Embryo_C4216_6_3D
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Regionally restricted Embryo_C4216_6_4C
TS22: thalamus Moderate Regionally restricted Embryo_C4216_6_4C
TS22: hypothalamus Absent
TS22: midbrain Strong Regionally restricted Embryo_C4216_6_4B
TS22: pretectum Absent
TS22: superior colliculus Strong Regionally restricted Embryo_C4216_6_4B
TS22: inferior colliculus Strong Ubiquitous Embryo_C4216_6_4B
TS22: midbrain tegmentum Strong Regionally restricted Embryo_C4216_6_4B
TS22: hindbrain Strong Regionally restricted Embryo_C4216_6_4B
TS22: cerebellum Absent
TS22: pons Strong Regionally restricted Embryo_C4216_6_4B
TS22: medulla oblongata Strong Regionally restricted Embryo_C4216_6_4B
TS22: spinal cord Moderate Regionally restricted Embryo_C4216_6_5A
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Strong Ubiquitous Embryo_C4216_6_5C
TS22: cranial ganglion Strong Ubiquitous Embryo_C4216_6_3B
TS22: dorsal root ganglion Strong Ubiquitous Embryo_C4216_6_5C
TS22: eye Strong Regionally restricted Embryo_C4216_6_1B
TS22: retina Strong Regionally restricted Embryo_C4216_6_1B
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Strong Regionally restricted Embryo_C4216_6_1B
TS22: inner ear Moderate Regionally restricted Embryo_C4216_6_3B
TS22: cochlea Moderate Regionally restricted Embryo_C4216_6_3B
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_C4216_6_2D
TS22: middle ear Strong Regionally restricted Embryo_C4216_6_1B
TS22: alimentary system Strong Regionally restricted Embryo_C4216_6_3A Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_C4216_6_3A
TS22: salivary gland Moderate Ubiquitous Embryo_C4216_6_3C
TS22: tongue Absent
TS22: tooth Strong Regionally restricted Embryo_C4216_6_3C
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Moderate Regionally restricted Embryo_C4216_6_2A
TS22: liver Moderate Ubiquitous Embryo_C4216_6_3C
TS22: respiratory system Strong Regionally restricted Embryo_C4216_6_5B
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Strong Regionally restricted Embryo_C4216_6_5B
TS22: urinary system Strong Regionally restricted Embryo_C4216_6_3C Expression was strong in the genito-urinary system.
TS22: metanephros Strong Regionally restricted Embryo_C4216_6_3C
TS22: ureter Weak Regionally restricted Embryo_C4216_6_4C
TS22: bladder Weak Regionally restricted Embryo_C4216_6_4C
TS22: urethra Weak Regionally restricted Embryo_C4216_6_4C
TS22: reproductive system Absent
TS22: genital tubercle Absent
TS22: gonad Absent
TS22: gland Strong Regionally restricted Embryo_C4216_6_3C Expression was strong in the endocrine system.
TS22: thyroid gland Strong Ubiquitous Embryo_C4216_6_4A
TS22: pituitary gland Absent
TS22: pancreas Strong Regionally restricted Embryo_C4216_6_3C
TS22: adrenal gland Weak Ubiquitous Embryo_C4216_6_3C
TS22: cardiovascular system Moderate Regionally restricted Embryo_C4216_6_4C
TS22: heart Moderate Regionally restricted Embryo_C4216_6_4C
TS22: heart atrium Moderate Regionally restricted Embryo_C4216_6_4C
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Moderate Regionally restricted Embryo_C4216_6_4B Expression was detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Moderate Ubiquitous Embryo_C4216_6_4B
TS22: appendicular skeleton Strong Regionally restricted Embryo_C4216_6_1C Expression was strong in the skeleton (limbs, shoulder, hip).
TS22: musculature Strong Regionally restricted Embryo_C4216_6_2D
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Strong Regionally restricted Embryo_C4216_6_6C Expression was strong in the skull (base and vault).
TS22: axial skeleton Strong Regionally restricted Embryo_C4216_6_2A
TS22: tail Weak Regionally restricted Embryo_C4216_6_4C
TS22: forelimb Strong Regionally restricted Embryo_C4216_6_1B
TS22: hindlimb Strong Regionally restricted Embryo_C4216_6_1B
TS22: integumental system Strong Regionally restricted Embryo_C4216_6_6C
TS22: skin Absent
TS22: hair Strong Regionally restricted Embryo_C4216_6_6C
TS22: vibrissa follicle Strong Regionally restricted Embryo_C4216_6_6C Expression was strong in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory