About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5420947
Gene symbol: Slc30a1
Gene name: solute carrier family 30 (zinc transporter), member 1
Probe: T56060
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH2887; Specimen C3877: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Moderate Regionally restricted Embryo_C3877_5_3B
TS22: central nervous system Moderate Regionally restricted Embryo_C3877_5_4C
TS22: telencephalon Moderate Regionally restricted Embryo_C3877_5_2B
TS22: cerebral cortex Moderate Regionally restricted Embryo_C3877_5_3C
TS22: neocortex Weak Scattered Embryo_C3877_5_3C
TS22: olfactory cortex Moderate Scattered Embryo_C3877_5_2B
TS22: main olfactory bulb Moderate Scattered Embryo_C3877_5_5A
TS22: piriform cortex Moderate Scattered Embryo_C3877_5_2B
TS22: hippocampus Moderate Scattered Embryo_C3877_5_2B
TS22: basal ganglia Moderate Scattered Embryo_C3877_5_2B
TS22: corpus striatum Moderate Scattered Embryo_C3877_5_2B Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Moderate Scattered Embryo_C3877_5_5A
TS22: amygdala Moderate Scattered Embryo_C3877_5_2B
TS22: telencephalon septum Moderate Scattered Embryo_C3877_5_5A
TS22: pallidum Moderate Scattered Embryo_C3877_5_5A Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Scattered Embryo_C3877_5_4C
TS22: thalamus Moderate Scattered Embryo_C3877_5_4C
TS22: hypothalamus Moderate Scattered Embryo_C3877_5_4C
TS22: midbrain Moderate Scattered Embryo_C3877_5_3B
TS22: pretectum Moderate Scattered Embryo_C3877_5_3B
TS22: superior colliculus Moderate Scattered Embryo_C3877_5_3B
TS22: inferior colliculus Moderate Scattered Embryo_C3877_5_3B
TS22: midbrain tegmentum Moderate Scattered Embryo_C3877_5_3B
TS22: hindbrain Moderate Scattered Embryo_C3877_5_3B
TS22: cerebellum Moderate Scattered Embryo_C3877_5_3B
TS22: pons Moderate Scattered Embryo_C3877_5_3B
TS22: medulla oblongata Moderate Scattered Embryo_C3877_5_3B
TS22: spinal cord Moderate Scattered Embryo_C3877_5_4C
TS22: choroid plexus Absent
TS22: meninges Moderate Regionally restricted Embryo_C3877_5_3A
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Absent
TS22: retina Absent
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Absent Expression was not detected in the digestive system.
TS22: intestine Absent
TS22: salivary gland Absent
TS22: tongue Absent
TS22: tooth Absent
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Absent
TS22: respiratory system Absent
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Absent
TS22: urinary system Absent Expression was not detected in the genito-urinary system.
TS22: metanephros Absent
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Absent
TS22: genital tubercle Absent
TS22: gonad Absent
TS22: gland Absent Expression was not detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Absent
TS22: forelimb Absent
TS22: hindlimb Absent
TS22: integumental system Strong Regionally restricted Embryo_C3877_5_2C
TS22: skin Absent
TS22: hair Strong Regionally restricted Embryo_C3877_5_2C
TS22: vibrissa follicle Strong Regionally restricted Embryo_C3877_5_2C Expression was strong in whisker follicle.
Specimen MH2888; Specimen C3892: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Moderate Regionally restricted Embryo_C3892_6_3B
TS22: central nervous system Moderate Scattered Embryo_C3892_6_3B
TS22: telencephalon Moderate Scattered Embryo_C3892_6_6A
TS22: cerebral cortex Moderate Scattered Embryo_C3892_6_6A
TS22: neocortex Moderate Scattered Embryo_C3892_6_5C
TS22: olfactory cortex Moderate Scattered Embryo_C3892_6_6A
TS22: main olfactory bulb Moderate Scattered Embryo_C3892_6_5A
TS22: piriform cortex Moderate Scattered Embryo_C3892_6_6A
TS22: hippocampus Moderate Scattered Embryo_C3892_6_6A
TS22: basal ganglia Moderate Scattered Embryo_C3892_6_6A
TS22: corpus striatum Moderate Scattered Embryo_C3892_6_6A Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Moderate Scattered Embryo_C3892_6_5A
TS22: amygdala Moderate Scattered Embryo_C3892_6_1D
TS22: telencephalon septum Moderate Scattered Embryo_C3892_6_5A
TS22: pallidum Moderate Scattered Embryo_C3892_6_5A Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Scattered Embryo_C3892_6_3B
TS22: thalamus Moderate Scattered Embryo_C3892_6_3D
TS22: hypothalamus Moderate Scattered Embryo_C3892_6_3B
TS22: midbrain Moderate Scattered Embryo_C3892_6_3B
TS22: pretectum Moderate Scattered Embryo_C3892_6_3B
TS22: superior colliculus Moderate Scattered Embryo_C3892_6_3B
TS22: inferior colliculus Moderate Scattered Embryo_C3892_6_3B
TS22: midbrain tegmentum Moderate Scattered Embryo_C3892_6_2D
TS22: hindbrain Moderate Scattered Embryo_C3892_6_2D
TS22: cerebellum Moderate Scattered Embryo_C3892_6_2D
TS22: pons Moderate Scattered Embryo_C3892_6_2D
TS22: medulla oblongata Moderate Scattered Embryo_C3892_6_2D
TS22: spinal cord Moderate Scattered Embryo_C3892_6_5A
TS22: choroid plexus Absent
TS22: meninges Moderate Regionally restricted Embryo_C3892_6_2D
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Absent
TS22: retina Absent
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Weak Regionally restricted Embryo_C3892_6_5A
TS22: olfactory epithelium Weak Regionally restricted Embryo_C3892_6_5A
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Weak Regionally restricted Embryo_C3892_6_3D Expression was weak in the digestive system.
TS22: intestine Absent
TS22: salivary gland Absent
TS22: tongue Absent
TS22: tooth Weak Regionally restricted Embryo_C3892_6_3D
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Weak Regionally restricted Embryo_C3892_6_5A
TS22: respiratory system Absent
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Absent
TS22: urinary system Weak Regionally restricted Embryo_C3892_6_5A Expression was weak in the genito-urinary system.
TS22: metanephros Absent
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Weak Regionally restricted Embryo_C3892_6_5A
TS22: reproductive system Weak Regionally restricted Embryo_C3892_6_2D
TS22: genital tubercle Absent
TS22: gonad Weak Regionally restricted Embryo_C3892_6_2D
TS22: gland Absent Expression was not detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Absent
TS22: forelimb Absent
TS22: hindlimb Absent
TS22: integumental system Strong Regionally restricted Embryo_C3892_6_2B
TS22: skin Absent
TS22: hair Strong Regionally restricted Embryo_C3892_6_2B
TS22: vibrissa follicle Strong Regionally restricted Embryo_C3892_6_2B Expression was strong in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory