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Gene Expression Data
Assay Details
Assay
Reference: J:143778 Tamplin OJ, et al., Integrated microarray and ChIP analysis identifies multiple Foxa2 dependent target genes in the notochord. Dev Biol. 2011 Dec 15;360(2):415-25
Assay type: RNA in situ
MGI Accession ID: MGI:5291769
Gene symbol: Atp9a
Gene name: ATPase, class II, type 9A
Probe: NIA clone H3152H05
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen E7.5: embryonic day 7.5 (more )
Note: These data are reported in Table S2.
Structure Level Pattern Image Note
TS11: node Strong ATP9A-E7.5-LAT
TS11: embryo Present Non-Uniform ATP9A-E7.5-LAT There is widespread expression in the embryo; there is strong expression in the posterior proximal epiblast.
Specimen E7.75: embryonic day 7.75 (more )
Note: These data are reported in Table S2.
Structure Level Pattern Image Note
TS11: node Strong Regionally restricted ATP9A-E7.75-LAT , ATP9A-E7.75-ANT , ATP9A-E7.75-POST , ATP9A-E7.75-DIST There is strong expression in the crown region of the node.
TS11: extraembryonic ectoderm Strong ATP9A-E7.75-POST , ATP9A-E7.75-DIST , ATP9A-E7.75-ANT , ATP9A-E7.75-LAT
Specimen E8.0: embryonic day 8.0 (more )
Note: These data are reported in Table S2.
Structure Level Pattern Image Note
TS12: notochord Strong Regionally restricted ATP9A-E8.0-PVD , ATP9A-E8.0-LAT There is strong expression in the posterior notochord.
TS12: embryo Present ATP9A-E8.0-PVD , ATP9A-E8.0-LAT There is strong expression in the tail bud; there is widespread expression elsewhere in the embryo.
TS12: hindgut diverticulum Strong ATP9A-E8.0-PVD , ATP9A-E8.0-LAT
Specimen E8.5: embryonic day 8.5 (more )
Note: These data are reported in Table S2.
Structure Level Pattern Image Note
TS13: notochord Strong Regionally restricted ATP9A-E8.5-LAT There is strong expression in the posterior notochord.
TS13: embryo Present Non-Uniform ATP9A-E8.5-LAT There is strong expression in the tail bud; there is widespread expression elsewhere in the embryo.
TS13: hindgut diverticulum Strong ATP9A-E8.5-LAT
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
MGI 6.23 		The Jackson Laboratory