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Gene Expression Data
Assay Details
Assay
Reference: J:88599 Kneussel M, et al., Distribution of transcripts for the brain-specific GDP/GTP exchange factor collybistin in the developing mouse brain. Eur J Neurosci. 2001 Feb;13(3):487-92
Assay type: RNA in situ
MGI Accession ID: MGI:5289925
Gene symbol: Arhgef9
Gene name: CDC42 guanine nucleotide exchange factor 9
Probe: Collybistin cDNA2
Probe preparation: Antisense labelled with digoxigenin RNA
Assay notes: The authors state that the data obtained with this probe is the similar as is shown with the full-length probe (assay MGI:5289912).
Results
Specimen E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: basal columns Present

Specimen E13: embryonic day 13.0 (more )
Structure Level Pattern Image Note
TS21: dorsal root ganglion Present
TS21: spinal cord Present Graded There is a dorsal-ventral gradient of expression.

Specimen E14: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: ear Strong
TS22: cortical plate Moderate
TS22: cerebral cortex subventricular zone Absent
TS22: cerebral cortex ventricular layer Absent

Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: cerebellum Present Regionally restricted Expression is in the purkinje layer.
TS26: cortical plate Present
TS26: cerebral cortex subventricular zone Absent
TS26: cerebral cortex ventricular zone Absent

Specimen P10: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cerebellum internal granule cell layer Present
TS28: cerebellum Present Regionally restricted Expression is in central cerebellar structures.
TS28: cerebellum external granule cell layer Absent

Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present
TS28: hippocampus CA1 Present
TS28: hippocampus CA3 Present
TS28: main olfactory bulb Present Regionally restricted Expression is in all neurons except the postmitotic neurons in the rostral migratory stream.
TS28: rostral migratory stream Absent
TS28: cerebellum Purkinje cell layer Strong
TS28: cerebellum internal granule cell layer Strong
TS28: cerebellum molecular layer Strong
TS28: cerebral cortex Present Uniform


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory