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Gene Expression Data
Assay Details
Assay
Reference: J:157883 Reinhard J, et al., Protein tyrosine phosphatases expression during development of mouse superior colliculus. Exp Brain Res. 2009 Dec;199(3-4):279-97
Assay type: RT-PCR
MGI Accession ID: MGI:5286975
Gene symbol: Ptpn6
Gene name: protein tyrosine phosphatase, non-receptor type 6
Probe: PTP1C primer set1
Probe preparation: labelled with SYBR green
Assay notes: This assay is a quantitative RT-PCR. The data was presented in a bar graph representing the relative expression ratio of the gene in relation to 2 housekeeping genes (beta-actin and cyclophilin) and was normalized to the expression level at E13. The primers amplify a 137bp product.
Results Image: 1A PTP1C
 Sample Information Bands Other Sample Information
Lane AgeStructure Size Not Specified (a) Amount Genetic BackgroundMutant Allele(s)Sex Note
E13 E13.0 TS21: midbrain Present 0.02 µg; total RNA NMRI Not Specified developing superior colliculus
E15 E15.0 TS23: superior colliculus Present 0.02 µg; total RNA NMRI Not Specified
E18 E18.0 TS26: superior colliculus Present 0.02 µg; total RNA NMRI Not Specified
P0 P0 TS27: superior colliculus Present 0.02 µg; total RNA NMRI Not Specified
P4 P4 TS28: superior colliculus Present 0.02 µg; total RNA NMRI Not Specified
P12 P12 TS28: superior colliculus Present 0.02 µg; total RNA NMRI Not Specified
P20 P20 TS28: superior colliculus Present 0.02 µg; total RNA NMRI Not Specified
Notes:
(a) Expression level was downregulated slightly at E15 and E18. At P0 the expression level was the same as at E13. From P4 to P20, a slight upregulation of the gene was observed (statistically not significant).
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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