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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944937
Gene symbol: Sim1
Gene name: single-minded family bHLH transcription factor 1
Probe: g00376
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00376 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindbrain Present Widespread g00376_sj_g46_072_e11 , g00376_sj_g46_022_e11
TS19: diencephalon Strong Regionally restricted g00376_sj_g46_072_e11 , g00376_sj_g46_022_e11 Expression was region specific and scattered.
TS19: midbrain Strong Regionally restricted g00376_sj_g46_022_e11 , g00376_sj_g46_072_e11 Expression was region specific and scattered.
TS19: future spinal cord Strong Regionally restricted g00376_sj_g46_072_e11 , g00376_sj_g46_022_e11 Expression was region specific and scattered.
Specimen g00376 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g00376_sj_g37_142_e15 , g00376_sj_g37_042_e15 , g00376_sj_g37_092_e15
TS23: ganglionic eminence Present Widespread g00376_sj_g37_092_e15 , g00376_sj_g37_042_e15 , g00376_sj_g37_142_e15
TS23: hindbrain Present Widespread g00376_sj_g37_092_e15 , g00376_sj_g37_142_e15 , g00376_sj_g37_042_e15
TS23: hippocampus Present Widespread g00376_sj_g37_092_e15 , g00376_sj_g37_042_e15 , g00376_sj_g37_142_e15
TS23: midbrain Present Widespread g00376_sj_g37_092_e15 , g00376_sj_g37_042_e15 , g00376_sj_g37_142_e15
TS23: neocortex Present Widespread g00376_sj_g37_092_e15 , g00376_sj_g37_142_e15 , g00376_sj_g37_042_e15
TS23: spinal cord Present Regionally restricted g00376_sj_g37_142_e15 , g00376_sj_g37_042_e15 , g00376_sj_g37_092_e15 Expression was region specific and scattered.
TS23: hypothalamus Strong Regionally restricted g00376_sj_g37_092_e15 , g00376_sj_g37_042_e15 , g00376_sj_g37_142_e15 Expression was region specific and scattered.
Specimen g00376 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00376_sj_g40_023_p7 , g00376_sj_g40_073_p7 , g00376_sj_g40_123_p7
TS28: basal ganglia Present Widespread g00376_sj_g40_073_p7 , g00376_sj_g40_023_p7 , g00376_sj_g40_123_p7
TS28: brainstem Present Widespread g00376_sj_g40_123_p7 , g00376_sj_g40_073_p7 , g00376_sj_g40_023_p7
TS28: cerebellum Present Widespread g00376_sj_g40_123_p7 , g00376_sj_g40_023_p7 , g00376_sj_g40_073_p7
TS28: cerebral cortex Present Widespread g00376_sj_g40_123_p7 , g00376_sj_g40_023_p7 , g00376_sj_g40_073_p7
TS28: choroid plexus Present Regionally restricted g00376_sj_g40_023_p7 , g00376_sj_g40_073_p7 , g00376_sj_g40_123_p7
TS28: hippocampus Present Regionally restricted g00376_sj_g40_023_p7 , g00376_sj_g40_073_p7 , g00376_sj_g40_123_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Regionally restricted g00376_sj_g40_023_p7 , g00376_sj_g40_073_p7 , g00376_sj_g40_123_p7 Expression was region specific and scattered.
TS28: meninges Present Regionally restricted g00376_sj_g40_123_p7 , g00376_sj_g40_023_p7 , g00376_sj_g40_073_p7
TS28: midbrain Present Widespread g00376_sj_g40_073_p7 , g00376_sj_g40_023_p7 , g00376_sj_g40_123_p7
TS28: main olfactory bulb Present Widespread g00376_sj_g40_073_p7 , g00376_sj_g40_023_p7 , g00376_sj_g40_123_p7
TS28: retina Present Regionally restricted g00376_sj_g40_123_p7 , g00376_sj_g40_073_p7 , g00376_sj_g40_023_p7
TS28: spinal cord Present Widespread g00376_sj_g40_023_p7 , g00376_sj_g40_123_p7 , g00376_sj_g40_073_p7
TS28: thalamus Present Widespread g00376_sj_g40_073_p7 , g00376_sj_g40_023_p7 , g00376_sj_g40_123_p7
Specimen g00376 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00376_sj_g57_047_ads , g00376_sj_g57_147_ads , g00376_sj_g57_097_ads , g00376_sj_g5_019_adc , g00376_sj_g5_069_adc
TS28: basal ganglia Present Widespread g00376_sj_g57_047_ads , g00376_sj_g57_147_ads , g00376_sj_g5_019_adc , g00376_sj_g57_097_ads , g00376_sj_g5_069_adc
TS28: brainstem Present Widespread g00376_sj_g57_147_ads , g00376_sj_g5_069_adc , g00376_sj_g57_097_ads , g00376_sj_g5_019_adc , g00376_sj_g57_047_ads
TS28: cerebellum Present Regionally restricted g00376_sj_g5_069_adc , g00376_sj_g5_019_adc , g00376_sj_g57_097_ads , g00376_sj_g57_047_ads , g00376_sj_g57_147_ads Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g00376_sj_g57_097_ads , g00376_sj_g5_019_adc , g00376_sj_g57_147_ads , g00376_sj_g57_047_ads , g00376_sj_g5_069_adc
TS28: choroid plexus Present Regionally restricted g00376_sj_g5_019_adc , g00376_sj_g5_069_adc , g00376_sj_g57_097_ads , g00376_sj_g57_147_ads , g00376_sj_g57_047_ads
TS28: hippocampus Present Regionally restricted g00376_sj_g57_097_ads , g00376_sj_g5_019_adc , g00376_sj_g57_047_ads , g00376_sj_g57_147_ads , g00376_sj_g5_069_adc Expression was region specific and scattered.
TS28: meninges Present Regionally restricted g00376_sj_g5_069_adc , g00376_sj_g57_047_ads , g00376_sj_g57_147_ads , g00376_sj_g57_097_ads , g00376_sj_g5_019_adc
TS28: midbrain Present Widespread g00376_sj_g57_097_ads , g00376_sj_g5_019_adc , g00376_sj_g57_147_ads , g00376_sj_g5_069_adc , g00376_sj_g57_047_ads
TS28: main olfactory bulb Present Widespread g00376_sj_g57_147_ads , g00376_sj_g5_019_adc , g00376_sj_g5_069_adc , g00376_sj_g57_047_ads , g00376_sj_g57_097_ads
TS28: retina Present Regionally restricted g00376_sj_g5_069_adc , g00376_sj_g57_097_ads , g00376_sj_g5_019_adc , g00376_sj_g57_147_ads , g00376_sj_g57_047_ads
TS28: spinal cord Present Widespread g00376_sj_g57_097_ads , g00376_sj_g5_019_adc , g00376_sj_g57_047_ads , g00376_sj_g5_069_adc , g00376_sj_g57_147_ads
TS28: thalamus Present Widespread g00376_sj_g57_047_ads , g00376_sj_g57_147_ads , g00376_sj_g57_097_ads , g00376_sj_g5_069_adc , g00376_sj_g5_019_adc
TS28: hypothalamus Strong Regionally restricted g00376_sj_g57_097_ads , g00376_sj_g57_147_ads , g00376_sj_g5_069_adc , g00376_sj_g57_047_ads , g00376_sj_g5_019_adc Expression was region specific and scattered.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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