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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944816
Gene symbol: Lhx6
Gene name: LIM homeobox protein 6
Probe: g00239
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00239 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Regionally restricted g00239_sj_g28_037_e11 , g00239_sj_g28_087_e11 Expression was region specific and scattered.
TS19: midbrain Present Widespread g00239_sj_g28_037_e11 , g00239_sj_g28_087_e11
TS19: hindbrain Present Widespread g00239_sj_g28_087_e11 , g00239_sj_g28_037_e11
TS19: future spinal cord Present Widespread g00239_sj_g28_087_e11 , g00239_sj_g28_037_e11
Specimen g00239 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g00239_sj_g28_087_e15 , g00239_sj_g28_037_e15 , g00239_sj_g28_137_e15
TS23: hindbrain Present Widespread g00239_sj_g28_087_e15 , g00239_sj_g28_137_e15 , g00239_sj_g28_037_e15
TS23: hippocampus Present Regionally restricted g00239_sj_g28_137_e15 , g00239_sj_g28_037_e15 , g00239_sj_g28_087_e15 Expression was region specific and scattered.
TS23: midbrain Present Widespread g00239_sj_g28_037_e15 , g00239_sj_g28_137_e15 , g00239_sj_g28_087_e15
TS23: neocortex Present Regionally restricted g00239_sj_g28_137_e15 , g00239_sj_g28_087_e15 , g00239_sj_g28_037_e15 Expression was region specific and scattered.
TS23: main olfactory bulb Present Widespread g00239_sj_g28_037_e15 , g00239_sj_g28_137_e15 , g00239_sj_g28_087_e15
TS23: spinal cord Present Widespread g00239_sj_g28_137_e15 , g00239_sj_g28_087_e15 , g00239_sj_g28_037_e15
TS23: ganglionic eminence Strong Regionally restricted g00239_sj_g28_087_e15 , g00239_sj_g28_137_e15 , g00239_sj_g28_037_e15 Expression was region specific and scattered.
TS23: hypothalamus Strong Regionally restricted g00239_sj_g28_037_e15 , g00239_sj_g28_137_e15 , g00239_sj_g28_087_e15 Expression was region specific and scattered.
TS23: retina Absent g00239_sj_g28_137_e15 , g00239_sj_g28_037_e15 , g00239_sj_g28_087_e15
Specimen g00239 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Regionally restricted g00239_sj_g28_087_p7 , g00239_sj_g28_137_p7 , g00239_sj_g28_037_p7 Expression was region specific and scattered.
TS28: basal ganglia Present Regionally restricted g00239_sj_g28_087_p7 , g00239_sj_g28_137_p7 , g00239_sj_g28_037_p7 Expression was region specific and scattered.
TS28: cerebellum Present Widespread g00239_sj_g28_137_p7 , g00239_sj_g28_087_p7 , g00239_sj_g28_037_p7
TS28: cerebral cortex Present Regionally restricted g00239_sj_g28_037_p7 , g00239_sj_g28_087_p7 , g00239_sj_g28_137_p7 Expression was region specific and scattered.
TS28: hippocampus Present Regionally restricted g00239_sj_g28_137_p7 , g00239_sj_g28_037_p7 , g00239_sj_g28_087_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Regionally restricted g00239_sj_g28_037_p7 , g00239_sj_g28_137_p7 , g00239_sj_g28_087_p7 Expression was region specific and scattered.
TS28: meninges Present Regionally restricted g00239_sj_g28_137_p7 , g00239_sj_g28_037_p7 , g00239_sj_g28_087_p7
TS28: main olfactory bulb Present Widespread g00239_sj_g28_137_p7 , g00239_sj_g28_037_p7 , g00239_sj_g28_087_p7
TS28: spinal cord Present Widespread g00239_sj_g28_087_p7 , g00239_sj_g28_037_p7 , g00239_sj_g28_137_p7
TS28: thalamus Present Widespread g00239_sj_g28_087_p7 , g00239_sj_g28_037_p7 , g00239_sj_g28_137_p7
TS28: brainstem Absent g00239_sj_g28_087_p7 , g00239_sj_g28_037_p7 , g00239_sj_g28_137_p7
TS28: choroid plexus Absent g00239_sj_g28_087_p7 , g00239_sj_g28_137_p7 , g00239_sj_g28_037_p7
TS28: midbrain Absent g00239_sj_g28_037_p7 , g00239_sj_g28_087_p7 , g00239_sj_g28_137_p7
TS28: retina Absent g00239_sj_g28_137_p7 , g00239_sj_g28_087_p7 , g00239_sj_g28_037_p7
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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