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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828894
Gene symbol: Trank1
Gene name: tetratricopeptide repeat and ankyrin repeat containing 1
Probe: T37825
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013745_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_01
Specimen euxassay_013745_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_02
Specimen euxassay_013745_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_03
Specimen euxassay_013745_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_04
Specimen euxassay_013745_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_05
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_05
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_05
TS23: seminiferous cord Strong Regionally restricted euxassay_013745_05
TS23: left lung Strong Regionally restricted euxassay_013745_05
Specimen euxassay_013745_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_06
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_06
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_06
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_06
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_06
TS23: seminiferous cord Strong Regionally restricted euxassay_013745_06
TS23: left lung Strong Regionally restricted euxassay_013745_06
Specimen euxassay_013745_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_07
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_07
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_07
TS23: adrenal cortex Strong Regionally restricted euxassay_013745_07
TS23: seminiferous cord Strong Regionally restricted euxassay_013745_07
Specimen euxassay_013745_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_08
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_08
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_08
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_08
TS23: adrenal cortex Strong Regionally restricted euxassay_013745_08
TS23: seminiferous cord Strong Regionally restricted euxassay_013745_08
TS23: left lung Strong Regionally restricted euxassay_013745_08
Specimen euxassay_013745_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_09
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_09
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_09
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_09
TS23: adrenal cortex Strong Regionally restricted euxassay_013745_09
TS23: left lung Strong Regionally restricted euxassay_013745_09
Specimen euxassay_013745_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_10
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_10
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013745_10
TS23: adrenal cortex Strong Regionally restricted euxassay_013745_10
TS23: left lung Strong Regionally restricted euxassay_013745_10
Specimen euxassay_013745_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_11
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_11
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013745_11
TS23: adrenal cortex Strong Regionally restricted euxassay_013745_11
TS23: left lung Strong Regionally restricted euxassay_013745_11
Specimen euxassay_013745_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_12
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_12
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_12
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013745_12
TS23: left lung Strong Regionally restricted euxassay_013745_12
Specimen euxassay_013745_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_13
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_13
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_13
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013745_13
Specimen euxassay_013745_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_14
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_14
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013745_14
Specimen euxassay_013745_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_15
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_15
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_15
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013745_15
TS23: right lung Strong Regionally restricted euxassay_013745_15
Specimen euxassay_013745_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_16
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_16
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_16
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_16
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013745_16
TS23: right lung Strong Regionally restricted euxassay_013745_16
Specimen euxassay_013745_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_17
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_17
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_013745_17
TS23: adrenal cortex Strong Regionally restricted euxassay_013745_17
Specimen euxassay_013745_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013745_18
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_18
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_18
TS23: adrenal cortex Strong Regionally restricted euxassay_013745_18
Specimen euxassay_013745_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013745_19
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_013745_19
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013745_19
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_013745_19
TS23: pons mantle layer Strong Regionally restricted euxassay_013745_19
TS23: adrenal cortex Strong Regionally restricted euxassay_013745_19
TS23: seminiferous cord Strong Regionally restricted euxassay_013745_19
TS23: right lung Strong Regionally restricted euxassay_013745_19
Specimen euxassay_013745_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_20
TS23: adrenal cortex Strong Regionally restricted euxassay_013745_20
TS23: seminiferous cord Strong Regionally restricted euxassay_013745_20
TS23: right lung Strong Regionally restricted euxassay_013745_20
Specimen euxassay_013745_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_21
TS23: seminiferous cord Strong Regionally restricted euxassay_013745_21
TS23: right lung Strong Regionally restricted euxassay_013745_21
Specimen euxassay_013745_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_22
TS23: seminiferous cord Strong Regionally restricted euxassay_013745_22
TS23: right lung Strong Regionally restricted euxassay_013745_22
Specimen euxassay_013745_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_23
TS23: right lung Strong Regionally restricted euxassay_013745_23
Specimen euxassay_013745_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_013745_24
TS23: right lung Strong Regionally restricted euxassay_013745_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory