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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828893
Gene symbol: Trank1
Gene name: tetratricopeptide repeat and ankyrin repeat containing 1
Probe: T35480
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008939_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_01
Specimen euxassay_008939_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_02
TS23: midbrain Strong Regionally restricted euxassay_008939_02
Specimen euxassay_008939_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_03
TS23: midbrain Strong Regionally restricted euxassay_008939_03
TS23: hindbrain Strong Regionally restricted euxassay_008939_03
Specimen euxassay_008939_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain Strong Regionally restricted euxassay_008939_04
TS23: hindbrain Strong Regionally restricted euxassay_008939_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_04
Specimen euxassay_008939_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008939_05
TS23: midbrain Strong Regionally restricted euxassay_008939_05
TS23: hindbrain Strong Regionally restricted euxassay_008939_05
TS23: diencephalon Strong Regionally restricted euxassay_008939_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_05
Specimen euxassay_008939_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_06
TS23: diencephalon Strong Regionally restricted euxassay_008939_06
TS23: hindbrain Strong Regionally restricted euxassay_008939_06
TS23: midbrain Strong Regionally restricted euxassay_008939_06
TS23: seminiferous cord Strong Regionally restricted euxassay_008939_06
TS23: adrenal cortex Strong Regionally restricted euxassay_008939_06
Specimen euxassay_008939_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon Strong Regionally restricted euxassay_008939_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_07
TS23: hindbrain Strong Regionally restricted euxassay_008939_07
TS23: midbrain Strong Regionally restricted euxassay_008939_07
TS23: spinal cord Strong Regionally restricted euxassay_008939_07
TS23: seminiferous cord Strong Regionally restricted euxassay_008939_07
TS23: adrenal cortex Strong Regionally restricted euxassay_008939_07
Specimen euxassay_008939_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_08
TS23: diencephalon Strong Regionally restricted euxassay_008939_08
TS23: hindbrain Strong Regionally restricted euxassay_008939_08
TS23: midbrain Strong Regionally restricted euxassay_008939_08
TS23: spinal cord Strong Regionally restricted euxassay_008939_08
TS23: seminiferous cord Strong Regionally restricted euxassay_008939_08
TS23: adrenal cortex Strong Regionally restricted euxassay_008939_08
Specimen euxassay_008939_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_09
TS23: diencephalon Strong Regionally restricted euxassay_008939_09
TS23: hindbrain Strong Regionally restricted euxassay_008939_09
TS23: midbrain Strong Regionally restricted euxassay_008939_09
TS23: spinal cord Strong Regionally restricted euxassay_008939_09
TS23: seminiferous cord Strong Regionally restricted euxassay_008939_09
TS23: adrenal cortex Strong Regionally restricted euxassay_008939_09
Specimen euxassay_008939_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon Strong Regionally restricted euxassay_008939_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_10
TS23: hindbrain Strong Regionally restricted euxassay_008939_10
TS23: midbrain Strong Regionally restricted euxassay_008939_10
TS23: spinal cord Strong Regionally restricted euxassay_008939_10
TS23: seminiferous cord Strong Regionally restricted euxassay_008939_10
TS23: adrenal cortex Strong Regionally restricted euxassay_008939_10
TS23: frenulum Strong Regionally restricted euxassay_008939_10
Specimen euxassay_008939_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon Strong Regionally restricted euxassay_008939_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_11
TS23: hindbrain Strong Regionally restricted euxassay_008939_11
TS23: midbrain Strong Regionally restricted euxassay_008939_11
TS23: spinal cord Strong Regionally restricted euxassay_008939_11
TS23: olfactory cortex Strong Regionally restricted euxassay_008939_11
TS23: frenulum Strong Regionally restricted euxassay_008939_11
Specimen euxassay_008939_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_12
TS23: hindbrain Strong Regionally restricted euxassay_008939_12
TS23: midbrain Strong Regionally restricted euxassay_008939_12
TS23: diencephalon Strong Regionally restricted euxassay_008939_12
TS23: olfactory cortex Strong Regionally restricted euxassay_008939_12
TS23: frenulum Strong Regionally restricted euxassay_008939_12
Specimen euxassay_008939_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_13
TS23: hindbrain Strong Regionally restricted euxassay_008939_13
TS23: midbrain Strong Regionally restricted euxassay_008939_13
TS23: diencephalon Strong Regionally restricted euxassay_008939_13
TS23: frenulum Strong Regionally restricted euxassay_008939_13
Specimen euxassay_008939_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon Strong Regionally restricted euxassay_008939_14
TS23: hindbrain Strong Regionally restricted euxassay_008939_14
TS23: midbrain Strong Regionally restricted euxassay_008939_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_14
TS23: frenulum Strong Regionally restricted euxassay_008939_14
Specimen euxassay_008939_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon Strong Regionally restricted euxassay_008939_15
TS23: hindbrain Strong Regionally restricted euxassay_008939_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_15
TS23: olfactory cortex Strong Regionally restricted euxassay_008939_15
TS23: adrenal cortex Strong Regionally restricted euxassay_008939_15
TS23: frenulum Strong Regionally restricted euxassay_008939_15
Specimen euxassay_008939_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_16
TS23: hindbrain Strong Regionally restricted euxassay_008939_16
TS23: olfactory cortex Strong Regionally restricted euxassay_008939_16
TS23: adrenal cortex Strong Regionally restricted euxassay_008939_16
TS23: frenulum Strong Regionally restricted euxassay_008939_16
Specimen euxassay_008939_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_17
TS23: olfactory cortex Strong Regionally restricted euxassay_008939_17
TS23: adrenal cortex Strong Regionally restricted euxassay_008939_17
TS23: frenulum Strong Regionally restricted euxassay_008939_17
Specimen euxassay_008939_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_18
TS23: olfactory cortex Strong Regionally restricted euxassay_008939_18
Specimen euxassay_008939_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_19
TS23: seminiferous cord Strong Regionally restricted euxassay_008939_19
Specimen euxassay_008939_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_20
TS23: seminiferous cord Strong Regionally restricted euxassay_008939_20
Specimen euxassay_008939_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_21
TS23: seminiferous cord Strong Regionally restricted euxassay_008939_21
Specimen euxassay_008939_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008939_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory