About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828568
Gene symbol: Syt13
Gene name: synaptotagmin XIII
Probe: MGC clone 31558
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001015_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_01
Specimen euxassay_001015_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_001015_02
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_02
Specimen euxassay_001015_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_001015_03
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001015_03
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_03
Specimen euxassay_001015_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_04
TS23: facial ganglion Moderate Uniform euxassay_001015_04
TS23: neural retina Moderate Regionally restricted euxassay_001015_04
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001015_04
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_04
Specimen euxassay_001015_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_05
TS23: facial ganglion Moderate Uniform euxassay_001015_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001015_05
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_05
Specimen euxassay_001015_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_06
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_001015_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001015_06
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_06
Specimen euxassay_001015_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_001015_07
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_07
TS23: glossopharyngeal ganglion Moderate Uniform euxassay_001015_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_07
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_07
TS23: amygdala Present euxassay_001015_07
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001015_07
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_07
Specimen euxassay_001015_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_001015_08
TS23: glossopharyngeal ganglion Moderate Uniform euxassay_001015_08
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_08
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_08
TS23: amygdala Present euxassay_001015_08
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_08
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001015_08
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_08
Specimen euxassay_001015_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_09
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_09
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_09
TS23: amygdala Present euxassay_001015_09
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_09
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001015_09
Specimen euxassay_001015_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_10
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_10
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_10
TS23: amygdala Present euxassay_001015_10
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_10
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001015_10
Specimen euxassay_001015_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_11
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_001015_11
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_11
TS23: amygdala Present euxassay_001015_11
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_11
Specimen euxassay_001015_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_12
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_001015_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_001015_12
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_12
TS23: telencephalon septum Present euxassay_001015_12
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_12
Specimen euxassay_001015_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_13
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_13
TS23: lower jaw incisor Weak Regionally restricted euxassay_001015_13
TS23: upper jaw incisor Weak Regionally restricted euxassay_001015_13
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_13
TS23: telencephalon septum Present euxassay_001015_13
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_13
Specimen euxassay_001015_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_14
TS23: thalamus mantle layer Weak Regionally restricted euxassay_001015_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_001015_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_001015_14
TS23: tongue Weak Regionally restricted euxassay_001015_14
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_14
TS23: telencephalon septum Present euxassay_001015_14
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_14
TS23: genital tubercle of male Moderate Regionally restricted euxassay_001015_14
Specimen euxassay_001015_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_15
TS23: lower jaw incisor Weak Regionally restricted euxassay_001015_15
TS23: upper jaw incisor Weak Regionally restricted euxassay_001015_15
TS23: tongue Weak Regionally restricted euxassay_001015_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_15
TS23: telencephalon septum Present euxassay_001015_15
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_15
TS23: genital tubercle of male Moderate Regionally restricted euxassay_001015_15
Specimen euxassay_001015_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_16
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_16
TS23: lower jaw incisor Weak Regionally restricted euxassay_001015_16
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_16
TS23: telencephalon septum Present euxassay_001015_16
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_16
TS23: genital tubercle of male Moderate Regionally restricted euxassay_001015_16
Specimen euxassay_001015_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_17
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_17
TS23: lower jaw incisor Weak Regionally restricted euxassay_001015_17
TS23: upper jaw incisor Weak Regionally restricted euxassay_001015_17
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_17
TS23: genital tubercle of male Moderate Regionally restricted euxassay_001015_17
Specimen euxassay_001015_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Uniform euxassay_001015_18
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_001015_18
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_18
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_18
TS23: lower jaw incisor Weak Regionally restricted euxassay_001015_18
TS23: upper jaw incisor Weak Regionally restricted euxassay_001015_18
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_18
TS23: genital tubercle of male Moderate Regionally restricted euxassay_001015_18
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_18
Specimen euxassay_001015_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Uniform euxassay_001015_19
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_19
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_001015_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001015_19
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001015_19
TS23: upper jaw incisor Weak Regionally restricted euxassay_001015_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_19
TS23: amygdala Present euxassay_001015_19
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_001015_19
TS23: genital tubercle of male Moderate Regionally restricted euxassay_001015_19
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_19
Specimen euxassay_001015_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Uniform euxassay_001015_20
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_20
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_001015_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_20
TS23: amygdala Present euxassay_001015_20
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_20
Specimen euxassay_001015_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Uniform euxassay_001015_21
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_21
TS23: amygdala Present euxassay_001015_21
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001015_21
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_21
Specimen euxassay_001015_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Uniform euxassay_001015_22
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_22
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_22
TS23: amygdala Present euxassay_001015_22
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001015_22
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_22
Specimen euxassay_001015_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_001015_23
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001015_23
TS23: amygdala Present euxassay_001015_23
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001015_23
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_23
Specimen euxassay_001015_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001015_24
TS23: chondrocranium Moderate Regionally restricted euxassay_001015_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory