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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828567
Gene symbol: Syt13
Gene name: synaptotagmin XIII
Probe: MGC clone 31558
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002933_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_01
Specimen euxassay_002933_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea stroma Strong Regionally restricted euxassay_002933_02
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_02
Specimen euxassay_002933_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cornea stroma Strong Regionally restricted euxassay_002933_03
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_03
Specimen euxassay_002933_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_04
TS23: facial ganglion Strong Regionally restricted euxassay_002933_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_04
TS23: cornea stroma Strong Regionally restricted euxassay_002933_04
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_04
Specimen euxassay_002933_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_05
TS23: facial ganglion Strong Regionally restricted euxassay_002933_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_05
TS23: cornea stroma Strong Regionally restricted euxassay_002933_05
Specimen euxassay_002933_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_002933_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_06
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_06
Specimen euxassay_002933_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_002933_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_002933_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_07
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_07
Specimen euxassay_002933_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_002933_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_002933_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_08
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_08
Specimen euxassay_002933_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_002933_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_09
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_002933_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002933_09
TS23: thalamus mantle layer Strong Uniform euxassay_002933_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_09
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_09
Specimen euxassay_002933_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002933_10
TS23: thalamus mantle layer Strong Uniform euxassay_002933_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_10
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_10
Specimen euxassay_002933_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002933_11
TS23: thalamus mantle layer Strong Uniform euxassay_002933_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_11
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_11
Specimen euxassay_002933_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002933_12
TS23: thalamus mantle layer Strong Uniform euxassay_002933_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_12
TS23: lower lip Moderate Regionally restricted euxassay_002933_12
TS23: upper lip Moderate Regionally restricted euxassay_002933_12
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_12
Specimen euxassay_002933_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002933_13
TS23: thalamus mantle layer Strong Uniform euxassay_002933_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_13
TS23: upper lip Strong Regionally restricted euxassay_002933_13
TS23: lower lip Strong Regionally restricted euxassay_002933_13
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_13
Specimen euxassay_002933_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002933_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_14
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_002933_14
TS23: upper lip Strong Regionally restricted euxassay_002933_14
TS23: lower lip Strong Regionally restricted euxassay_002933_14
Specimen euxassay_002933_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002933_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_15
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_002933_15
TS23: upper lip Strong Regionally restricted euxassay_002933_15
TS23: lower lip Strong Regionally restricted euxassay_002933_15
Specimen euxassay_002933_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_16
TS23: thalamus mantle layer Strong Uniform euxassay_002933_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002933_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_16
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_002933_16
TS23: upper lip Strong Regionally restricted euxassay_002933_16
TS23: lower lip Strong Regionally restricted euxassay_002933_16
Specimen euxassay_002933_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_17
TS23: thalamus mantle layer Strong Uniform euxassay_002933_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_17
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002933_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_002933_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_17
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_002933_17
TS23: upper lip Weak Regionally restricted euxassay_002933_17
TS23: lower lip Weak Regionally restricted euxassay_002933_17
Specimen euxassay_002933_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_002933_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_002933_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_18
TS23: thalamus mantle layer Strong Uniform euxassay_002933_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002933_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_002933_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_18
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_002933_18
TS23: upper lip Moderate Regionally restricted euxassay_002933_18
Specimen euxassay_002933_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_002933_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_19
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_002933_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_19
TS23: thalamus mantle layer Strong Uniform euxassay_002933_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_19
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_002933_19
TS23: upper lip Moderate Regionally restricted euxassay_002933_19
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_19
Specimen euxassay_002933_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_002933_20
TS23: dorsal root ganglion Strong Regionally restricted euxassay_002933_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_20
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002933_20
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_20
Specimen euxassay_002933_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002933_21
TS23: facial ganglion Moderate Regionally restricted euxassay_002933_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_002933_21
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_21
Specimen euxassay_002933_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002933_22
TS23: facial ganglion Moderate Regionally restricted euxassay_002933_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_22
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_22
Specimen euxassay_002933_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002933_23
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_23
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_23
Specimen euxassay_002933_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002933_24
TS23: cornea stroma Strong Regionally restricted euxassay_002933_24
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_002933_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory