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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828563
Gene symbol: Synpr
Gene name: synaptoporin
Probe: MGC clone 31661
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001093_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_01
Specimen euxassay_001093_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_02
Specimen euxassay_001093_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001093_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_03
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_001093_03
Specimen euxassay_001093_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001093_04
TS23: facial ganglion Weak Uniform euxassay_001093_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_04
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_001093_04
Specimen euxassay_001093_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001093_05
TS23: facial ganglion Moderate Regionally restricted euxassay_001093_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001093_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_05
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001093_05
Specimen euxassay_001093_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Weak Uniform euxassay_001093_06
TS23: trigeminal ganglion Weak Uniform euxassay_001093_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001093_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001093_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_06
Specimen euxassay_001093_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001093_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001093_07
TS23: trigeminal ganglion Weak Uniform euxassay_001093_07
TS23: facial ganglion Weak Uniform euxassay_001093_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_07
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_07
Specimen euxassay_001093_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001093_08
TS23: trigeminal ganglion Weak Uniform euxassay_001093_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001093_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001093_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_08
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_08
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_08
Specimen euxassay_001093_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001093_09
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001093_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001093_09
TS23: trigeminal ganglion Weak Uniform euxassay_001093_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_09
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001093_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_09
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_09
Specimen euxassay_001093_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001093_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_10
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001093_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_10
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_10
Specimen euxassay_001093_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001093_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_001093_11
TS23: dorsal grey horn Moderate Regionally restricted euxassay_001093_11
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001093_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_11
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_11
Specimen euxassay_001093_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001093_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_001093_12
TS23: dorsal grey horn Moderate Regionally restricted euxassay_001093_12
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001093_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_12
TS23: pons marginal layer Moderate Regionally restricted euxassay_001093_12
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001093_12
Specimen euxassay_001093_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal grey horn Moderate Regionally restricted euxassay_001093_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_001093_13
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001093_13
Specimen euxassay_001093_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal grey horn Moderate Regionally restricted euxassay_001093_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_001093_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001093_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001093_14
Specimen euxassay_001093_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal grey horn Moderate Regionally restricted euxassay_001093_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_001093_15
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001093_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_15
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_15
Specimen euxassay_001093_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal grey horn Moderate Regionally restricted euxassay_001093_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_001093_16
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001093_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001093_16
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001093_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_16
Specimen euxassay_001093_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001093_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_001093_17
TS23: dorsal grey horn Moderate Regionally restricted euxassay_001093_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_17
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_17
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001093_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001093_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_17
Specimen euxassay_001093_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001093_18
TS23: vagus ganglion Moderate Regionally restricted euxassay_001093_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001093_18
TS23: trigeminal ganglion Weak Uniform euxassay_001093_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_18
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_18
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001093_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001093_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_18
Specimen euxassay_001093_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_001093_19
TS23: glossopharyngeal ganglion Moderate Uniform euxassay_001093_19
TS23: trigeminal ganglion Weak Uniform euxassay_001093_19
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_001093_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001093_19
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_19
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001093_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001093_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001093_19
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001093_19
Specimen euxassay_001093_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_001093_20
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001093_20
TS23: trigeminal ganglion Weak Uniform euxassay_001093_20
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001093_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_20
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001093_20
TS23: pons mantle layer Moderate Regionally restricted euxassay_001093_20
Specimen euxassay_001093_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001093_21
TS23: facial ganglion Weak Uniform euxassay_001093_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_21
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001093_21
Specimen euxassay_001093_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001093_22
TS23: facial ganglion Weak Uniform euxassay_001093_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_22
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001093_22
Specimen euxassay_001093_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Uniform euxassay_001093_23
TS23: facial ganglion Weak Uniform euxassay_001093_23
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_23
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_001093_23
Specimen euxassay_001093_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001093_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory