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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828562
Gene symbol: Synpr
Gene name: synaptoporin
Probe: MGC clone 31661
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003004_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_01
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_01
Specimen euxassay_003004_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_02
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_02
Specimen euxassay_003004_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_03
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_03
Specimen euxassay_003004_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_04
TS23: facial ganglion Moderate Regionally restricted euxassay_003004_04
Specimen euxassay_003004_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_05
TS23: facial ganglion Moderate Regionally restricted euxassay_003004_05
TS23: hindbrain Strong Regionally restricted euxassay_003004_05
Specimen euxassay_003004_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_06
TS23: facial ganglion Moderate Regionally restricted euxassay_003004_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003004_06
TS23: hindbrain Strong Regionally restricted euxassay_003004_06
Specimen euxassay_003004_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003004_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_07
TS23: facial ganglion Moderate Regionally restricted euxassay_003004_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003004_07
TS23: midbrain Strong Regionally restricted euxassay_003004_07
TS23: hindbrain Strong Regionally restricted euxassay_003004_07
Specimen euxassay_003004_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003004_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003004_08
TS23: diencephalon Strong Regionally restricted euxassay_003004_08
TS23: hindbrain Strong Regionally restricted euxassay_003004_08
TS23: midbrain Strong Regionally restricted euxassay_003004_08
Specimen euxassay_003004_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003004_09
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003004_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003004_09
TS23: diencephalon Strong Regionally restricted euxassay_003004_09
TS23: hindbrain Strong Regionally restricted euxassay_003004_09
TS23: midbrain Strong Regionally restricted euxassay_003004_09
Specimen euxassay_003004_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003004_10
TS23: diencephalon Strong Regionally restricted euxassay_003004_10
TS23: hindbrain Strong Regionally restricted euxassay_003004_10
TS23: midbrain Strong Regionally restricted euxassay_003004_10
TS23: ventral grey horn Strong Regionally restricted euxassay_003004_10
TS23: dorsal grey horn Strong Regionally restricted euxassay_003004_10
Specimen euxassay_003004_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003004_11
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_003004_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003004_11
TS23: diencephalon Strong Regionally restricted euxassay_003004_11
TS23: hindbrain Strong Regionally restricted euxassay_003004_11
TS23: midbrain Strong Regionally restricted euxassay_003004_11
TS23: ventral grey horn Strong Regionally restricted euxassay_003004_11
TS23: dorsal grey horn Strong Regionally restricted euxassay_003004_11
Specimen euxassay_003004_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_003004_12
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003004_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003004_12
TS23: diencephalon Strong Regionally restricted euxassay_003004_12
TS23: hindbrain Strong Regionally restricted euxassay_003004_12
TS23: midbrain Strong Regionally restricted euxassay_003004_12
TS23: ventral grey horn Strong Regionally restricted euxassay_003004_12
TS23: dorsal grey horn Strong Regionally restricted euxassay_003004_12
TS23: thymus primordium Moderate Regionally restricted euxassay_003004_12
Specimen euxassay_003004_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003004_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_13
TS23: diencephalon Strong Regionally restricted euxassay_003004_13
TS23: ventral grey horn Strong Regionally restricted euxassay_003004_13
TS23: dorsal grey horn Strong Regionally restricted euxassay_003004_13
TS23: thymus primordium Moderate Regionally restricted euxassay_003004_13
Specimen euxassay_003004_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_14
TS23: midbrain Strong Regionally restricted euxassay_003004_14
TS23: hindbrain Strong Regionally restricted euxassay_003004_14
TS23: diencephalon Strong Regionally restricted euxassay_003004_14
TS23: ventral grey horn Strong Regionally restricted euxassay_003004_14
TS23: dorsal grey horn Strong Regionally restricted euxassay_003004_14
Specimen euxassay_003004_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003004_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_15
TS23: midbrain Strong Regionally restricted euxassay_003004_15
TS23: hindbrain Strong Regionally restricted euxassay_003004_15
TS23: diencephalon Strong Regionally restricted euxassay_003004_15
TS23: ventral grey horn Strong Regionally restricted euxassay_003004_15
TS23: dorsal grey horn Strong Regionally restricted euxassay_003004_15
TS23: thymus primordium Moderate Regionally restricted euxassay_003004_15
Specimen euxassay_003004_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003004_16
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_003004_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_16
TS23: midbrain Strong Regionally restricted euxassay_003004_16
TS23: hindbrain Strong Regionally restricted euxassay_003004_16
TS23: diencephalon Strong Regionally restricted euxassay_003004_16
TS23: ventral grey horn Strong Regionally restricted euxassay_003004_16
TS23: dorsal grey horn Strong Regionally restricted euxassay_003004_16
Specimen euxassay_003004_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003004_17
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_003004_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003004_17
TS23: diencephalon Strong Regionally restricted euxassay_003004_17
TS23: hindbrain Strong Regionally restricted euxassay_003004_17
TS23: midbrain Strong Regionally restricted euxassay_003004_17
TS23: ventral grey horn Strong Regionally restricted euxassay_003004_17
TS23: dorsal grey horn Strong Regionally restricted euxassay_003004_17
Specimen euxassay_003004_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_003004_18
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_003004_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003004_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003004_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003004_18
TS23: medulla oblongata Strong Regionally restricted euxassay_003004_18
TS23: metencephalon Strong Regionally restricted euxassay_003004_18
TS23: midbrain Strong Regionally restricted euxassay_003004_18
TS23: diencephalon Strong Regionally restricted euxassay_003004_18
Specimen euxassay_003004_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003004_19
TS23: metencephalon basal plate Strong Regionally restricted euxassay_003004_19
TS23: metencephalon alar plate Strong Regionally restricted euxassay_003004_19
TS23: midbrain Strong Regionally restricted euxassay_003004_19
TS23: medulla oblongata Strong Regionally restricted euxassay_003004_19
TS23: diencephalon Strong Regionally restricted euxassay_003004_19
Specimen euxassay_003004_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_003004_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003004_20
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003004_20
TS23: metencephalon basal plate Strong Regionally restricted euxassay_003004_20
Specimen euxassay_003004_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_21
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_003004_21
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_21
TS23: facial ganglion Moderate Regionally restricted euxassay_003004_21
Specimen euxassay_003004_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_22
TS23: facial ganglion Moderate Regionally restricted euxassay_003004_22
Specimen euxassay_003004_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_23
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_23
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003004_23
TS23: facial ganglion Moderate Regionally restricted euxassay_003004_23
Specimen euxassay_003004_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_003004_24
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_003004_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory