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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828560
Gene symbol: Synpo
Gene name: synaptopodin
Probe: T39011
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010928_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_010928_01
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_01
TS23: vault of skull Moderate Regionally restricted euxassay_010928_01
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_01
Specimen euxassay_010928_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_02
TS23: vault of skull Moderate Regionally restricted euxassay_010928_02
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_010928_02
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_02
TS23: fibula Moderate Regionally restricted euxassay_010928_02
TS23: tibia Moderate Regionally restricted euxassay_010928_02
Specimen euxassay_010928_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_03
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_010928_03
TS23: humerus Moderate Regionally restricted euxassay_010928_03
TS23: forelimb digit 4 phalanx Moderate Regionally restricted euxassay_010928_03
TS23: fibula Moderate Regionally restricted euxassay_010928_03
TS23: tibia Moderate Regionally restricted euxassay_010928_03
Specimen euxassay_010928_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_04
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_010928_04
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_010928_04
TS23: forelimb digit 4 phalanx Moderate Regionally restricted euxassay_010928_04
Specimen euxassay_010928_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_05
TS23: otic capsule Moderate Regionally restricted euxassay_010928_05
TS23: axial skeleton Moderate Regionally restricted euxassay_010928_05
TS23: rib Moderate Regionally restricted euxassay_010928_05
Specimen euxassay_010928_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_06
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_06
TS23: otic capsule Moderate Regionally restricted euxassay_010928_06
TS23: rib Strong Regionally restricted euxassay_010928_06
TS23: axial skeleton Strong Regionally restricted euxassay_010928_06
TS23: upper jaw molar Strong Regionally restricted euxassay_010928_06
TS23: lower jaw molar Strong Regionally restricted euxassay_010928_06
TS23: femur Moderate Regionally restricted euxassay_010928_06
Specimen euxassay_010928_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_07
TS23: otic capsule Strong Regionally restricted euxassay_010928_07
TS23: axial skeleton Strong Regionally restricted euxassay_010928_07
TS23: rib Strong Regionally restricted euxassay_010928_07
TS23: aorta Strong Regionally restricted euxassay_010928_07
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_010928_07
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_010928_07
TS23: forelimb digit 4 phalanx Moderate Regionally restricted euxassay_010928_07
Specimen euxassay_010928_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_08
TS23: axial skeleton Strong Regionally restricted euxassay_010928_08
TS23: rib Strong Regionally restricted euxassay_010928_08
TS23: heart valve Strong Regionally restricted euxassay_010928_08
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_010928_08
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_010928_08
TS23: forelimb digit 4 phalanx Moderate Regionally restricted euxassay_010928_08
Specimen euxassay_010928_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basisphenoid bone Moderate Regionally restricted euxassay_010928_09
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_09
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_09
TS23: axial skeleton Strong Regionally restricted euxassay_010928_09
TS23: rib Strong Regionally restricted euxassay_010928_09
TS23: aorta Strong Regionally restricted euxassay_010928_09
TS23: heart valve Strong Regionally restricted euxassay_010928_09
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_010928_09
Specimen euxassay_010928_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basisphenoid bone Moderate Regionally restricted euxassay_010928_10
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_10
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_10
TS23: rib Strong Regionally restricted euxassay_010928_10
TS23: axial skeleton Strong Regionally restricted euxassay_010928_10
TS23: heart valve Strong Regionally restricted euxassay_010928_10
Specimen euxassay_010928_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_11
TS23: basisphenoid bone Moderate Regionally restricted euxassay_010928_11
TS23: naris Strong Regionally restricted euxassay_010928_11
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_11
TS23: axial skeleton Strong Regionally restricted euxassay_010928_11
TS23: sternum Strong Regionally restricted euxassay_010928_11
TS23: heart valve Strong Regionally restricted euxassay_010928_11
TS23: trachea cartilaginous ring Strong Regionally restricted euxassay_010928_11
TS23: larynx Strong Regionally restricted euxassay_010928_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_010928_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_010928_11
Specimen euxassay_010928_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_12
TS23: basisphenoid bone Moderate Regionally restricted euxassay_010928_12
TS23: naris Strong Regionally restricted euxassay_010928_12
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_12
TS23: heart valve Strong Regionally restricted euxassay_010928_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_010928_12
Specimen euxassay_010928_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naris Strong Regionally restricted euxassay_010928_13
TS23: nasal septum Strong Regionally restricted euxassay_010928_13
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_010928_13
Specimen euxassay_010928_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_14
TS23: naris Strong Regionally restricted euxassay_010928_14
TS23: otic capsule Strong Regionally restricted euxassay_010928_14
TS23: axial skeleton Moderate Regionally restricted euxassay_010928_14
TS23: femur Moderate Regionally restricted euxassay_010928_14
Specimen euxassay_010928_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_15
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_15
TS23: naris Strong Regionally restricted euxassay_010928_15
TS23: otic capsule Strong Regionally restricted euxassay_010928_15
TS23: rib Strong Regionally restricted euxassay_010928_15
Specimen euxassay_010928_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_16
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_16
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_16
TS23: otic capsule Strong Regionally restricted euxassay_010928_16
TS23: rib Moderate Regionally restricted euxassay_010928_16
TS23: femur Moderate Regionally restricted euxassay_010928_16
Specimen euxassay_010928_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_17
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_17
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_010928_17
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010928_17
TS23: rib Moderate Regionally restricted euxassay_010928_17
TS23: lower jaw molar Strong Regionally restricted euxassay_010928_17
TS23: upper jaw molar Strong Regionally restricted euxassay_010928_17
Specimen euxassay_010928_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_18
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_18
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_010928_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_010928_18
TS23: rib Moderate Regionally restricted euxassay_010928_18
TS23: lower jaw molar Strong Regionally restricted euxassay_010928_18
TS23: upper jaw molar Strong Regionally restricted euxassay_010928_18
TS23: humerus Moderate Regionally restricted euxassay_010928_18
Specimen euxassay_010928_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_19
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_19
TS23: temporal bone petrous part Moderate Regionally restricted euxassay_010928_19
TS23: rib Moderate Regionally restricted euxassay_010928_19
TS23: humerus Moderate Regionally restricted euxassay_010928_19
TS23: femur Moderate Regionally restricted euxassay_010928_19
Specimen euxassay_010928_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basioccipital bone Moderate Regionally restricted euxassay_010928_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010928_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory