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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828558
Gene symbol: Synj1
Gene name: synaptojanin 1
Probe: T6333
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003353_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Weak Regionally restricted euxassay_003353_01
Specimen euxassay_003353_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_02
TS23: brain Weak Regionally restricted euxassay_003353_02
Specimen euxassay_003353_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_03
TS23: facial ganglion Weak Regionally restricted euxassay_003353_03
TS23: brain Weak Regionally restricted euxassay_003353_03
Specimen euxassay_003353_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_04
TS23: facial ganglion Weak Regionally restricted euxassay_003353_04
TS23: brain Weak Regionally restricted euxassay_003353_04
Specimen euxassay_003353_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_05
TS23: brain Weak Regionally restricted euxassay_003353_05
Specimen euxassay_003353_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_06
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003353_06
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003353_06
TS23: brain Weak Regionally restricted euxassay_003353_06
Specimen euxassay_003353_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003353_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003353_07
TS23: brain Weak Regionally restricted euxassay_003353_07
Specimen euxassay_003353_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Regionally restricted euxassay_003353_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_08
TS23: brain Weak Regionally restricted euxassay_003353_08
Specimen euxassay_003353_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003353_09
TS23: brain Weak Regionally restricted euxassay_003353_09
TS23: spinal cord Weak Regionally restricted euxassay_003353_09
Specimen euxassay_003353_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003353_10
TS23: brain Weak Regionally restricted euxassay_003353_10
TS23: spinal cord Weak Regionally restricted euxassay_003353_10
Specimen euxassay_003353_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Weak Regionally restricted euxassay_003353_11
TS23: spinal cord Weak Regionally restricted euxassay_003353_11
Specimen euxassay_003353_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Weak Regionally restricted euxassay_003353_12
TS23: spinal cord Weak Regionally restricted euxassay_003353_12
Specimen euxassay_003353_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003353_13
TS23: brain Weak Regionally restricted euxassay_003353_13
TS23: spinal cord Weak Regionally restricted euxassay_003353_13
Specimen euxassay_003353_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Weak Regionally restricted euxassay_003353_14
TS23: spinal cord Weak Regionally restricted euxassay_003353_14
Specimen euxassay_003353_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Weak Regionally restricted euxassay_003353_15
TS23: spinal cord Weak Regionally restricted euxassay_003353_15
Specimen euxassay_003353_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Weak Regionally restricted euxassay_003353_16
TS23: spinal cord Weak Regionally restricted euxassay_003353_16
Specimen euxassay_003353_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_17
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003353_17
TS23: vagus ganglion Weak Regionally restricted euxassay_003353_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003353_17
TS23: brain Weak Regionally restricted euxassay_003353_17
TS23: spinal cord Weak Regionally restricted euxassay_003353_17
Specimen euxassay_003353_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003353_18
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003353_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003353_18
TS23: brain Weak Regionally restricted euxassay_003353_18
TS23: spinal cord Weak Regionally restricted euxassay_003353_18
Specimen euxassay_003353_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_19
TS23: facial ganglion Weak Regionally restricted euxassay_003353_19
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_003353_19
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003353_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003353_19
TS23: brain Weak Regionally restricted euxassay_003353_19
TS23: spinal cord Weak Regionally restricted euxassay_003353_19
Specimen euxassay_003353_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_20
TS23: facial ganglion Weak Regionally restricted euxassay_003353_20
TS23: brain Weak Regionally restricted euxassay_003353_20
Specimen euxassay_003353_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_21
TS23: facial ganglion Weak Regionally restricted euxassay_003353_21
TS23: brain Weak Regionally restricted euxassay_003353_21
Specimen euxassay_003353_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003353_22
TS23: brain Weak Regionally restricted euxassay_003353_22
Specimen euxassay_003353_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Weak Regionally restricted euxassay_003353_23
Specimen euxassay_003353_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Weak Regionally restricted euxassay_003353_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory