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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828541
Gene symbol: Supt16
Gene name: SPT16, facilitates chromatin remodeling subunit
Probe: T55195
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019556_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_01
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_019556_01
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_019556_01
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_019556_01
Specimen euxassay_019556_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_02
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_019556_02
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_019556_02
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_019556_02
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_019556_02
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_019556_02
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_019556_02
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019556_02
Specimen euxassay_019556_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_03
TS23: stomach Moderate Regionally restricted euxassay_019556_03
TS23: vibrissa Moderate Regionally restricted euxassay_019556_03
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_019556_03
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_019556_03
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019556_03
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_03
Specimen euxassay_019556_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_04
TS23: stomach Strong Regionally restricted euxassay_019556_04
TS23: vibrissa Moderate Regionally restricted euxassay_019556_04
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019556_04
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_04
Specimen euxassay_019556_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_05
TS23: stomach Moderate Regionally restricted euxassay_019556_05
TS23: midgut Moderate Regionally restricted euxassay_019556_05
TS23: vibrissa Strong Regionally restricted euxassay_019556_05
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_019556_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019556_05
Specimen euxassay_019556_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_06
TS23: lung Strong Regionally restricted euxassay_019556_06
TS23: midgut Moderate Regionally restricted euxassay_019556_06
TS23: stomach Moderate Regionally restricted euxassay_019556_06
TS23: vibrissa Strong Regionally restricted euxassay_019556_06
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_06
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_019556_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019556_06
Specimen euxassay_019556_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_07
TS23: lung Strong Regionally restricted euxassay_019556_07
TS23: stomach Moderate Regionally restricted euxassay_019556_07
TS23: midgut Moderate Regionally restricted euxassay_019556_07
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_07
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019556_07
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_019556_07
Specimen euxassay_019556_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019556_08
TS23: liver lobe Strong Regionally restricted euxassay_019556_08
TS23: lung Strong Regionally restricted euxassay_019556_08
TS23: midgut Moderate Regionally restricted euxassay_019556_08
TS23: stomach Moderate Regionally restricted euxassay_019556_08
TS23: sublingual gland primordium Strong Regionally restricted euxassay_019556_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_08
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_08
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_019556_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019556_08
Specimen euxassay_019556_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019556_09
TS23: liver lobe Strong Regionally restricted euxassay_019556_09
TS23: lung Strong Regionally restricted euxassay_019556_09
TS23: midgut Strong Regionally restricted euxassay_019556_09
TS23: stomach Moderate Regionally restricted euxassay_019556_09
TS23: sublingual gland primordium Strong Regionally restricted euxassay_019556_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_09
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_09
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_019556_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019556_09
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019556_09
Specimen euxassay_019556_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019556_10
TS23: upper jaw incisor Moderate Regionally restricted euxassay_019556_10
TS23: lower jaw incisor Moderate Regionally restricted euxassay_019556_10
TS23: liver lobe Strong Regionally restricted euxassay_019556_10
TS23: lung Strong Regionally restricted euxassay_019556_10
TS23: midgut Strong Regionally restricted euxassay_019556_10
TS23: sublingual gland primordium Strong Regionally restricted euxassay_019556_10
TS23: pancreas Moderate Regionally restricted euxassay_019556_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_10
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_019556_10
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_10
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019556_10
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019556_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_10
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019556_10
Specimen euxassay_019556_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019556_11
TS23: upper jaw incisor Moderate Regionally restricted euxassay_019556_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_019556_11
TS23: liver lobe Strong Regionally restricted euxassay_019556_11
TS23: lung Strong Regionally restricted euxassay_019556_11
TS23: midgut Strong Regionally restricted euxassay_019556_11
TS23: pancreas Moderate Regionally restricted euxassay_019556_11
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_019556_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_11
TS23: vomeronasal organ Weak Regionally restricted euxassay_019556_11
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019556_11
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019556_11
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019556_11
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019556_11
Specimen euxassay_019556_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Regionally restricted euxassay_019556_12
TS23: liver lobe Strong Regionally restricted euxassay_019556_12
TS23: lung Strong Regionally restricted euxassay_019556_12
TS23: midgut Moderate Regionally restricted euxassay_019556_12
TS23: pancreas Weak Regionally restricted euxassay_019556_12
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_019556_12
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_12
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_019556_12
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019556_12
Specimen euxassay_019556_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Regionally restricted euxassay_019556_13
TS23: liver lobe Strong Regionally restricted euxassay_019556_13
TS23: lung Strong Regionally restricted euxassay_019556_13
TS23: midgut Strong Regionally restricted euxassay_019556_13
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_019556_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_13
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019556_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019556_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019556_13
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019556_13
TS23: urethra Weak Regionally restricted euxassay_019556_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_019556_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Regionally restricted euxassay_019556_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_019556_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_019556_14
TS23: liver lobe Strong Regionally restricted euxassay_019556_14
TS23: lung Strong Regionally restricted euxassay_019556_14
TS23: midgut Strong Regionally restricted euxassay_019556_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_14
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_14
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_019556_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_14
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019556_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019556_14
TS23: dorsal grey horn Moderate Regionally restricted euxassay_019556_14
TS23: urethra Weak Regionally restricted euxassay_019556_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_019556_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Regionally restricted euxassay_019556_15
TS23: upper jaw incisor Moderate Regionally restricted euxassay_019556_15
TS23: lower jaw incisor Moderate Regionally restricted euxassay_019556_15
TS23: liver lobe Strong Regionally restricted euxassay_019556_15
TS23: lung Strong Regionally restricted euxassay_019556_15
TS23: midgut Moderate Regionally restricted euxassay_019556_15
TS23: hindgut Moderate Regionally restricted euxassay_019556_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_15
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_15
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_019556_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_15
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_019556_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019556_15
TS23: dorsal grey horn Moderate Regionally restricted euxassay_019556_15
Specimen euxassay_019556_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Regionally restricted euxassay_019556_16
TS23: liver lobe Strong Regionally restricted euxassay_019556_16
TS23: lung Strong Regionally restricted euxassay_019556_16
TS23: hindgut Moderate Regionally restricted euxassay_019556_16
TS23: midgut Moderate Regionally restricted euxassay_019556_16
TS23: sublingual gland primordium Strong Regionally restricted euxassay_019556_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_16
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_16
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019556_16
TS23: dorsal grey horn Moderate Regionally restricted euxassay_019556_16
Specimen euxassay_019556_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_17
TS23: lung Strong Regionally restricted euxassay_019556_17
TS23: sublingual gland primordium Strong Regionally restricted euxassay_019556_17
TS23: pancreas Weak Regionally restricted euxassay_019556_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_019556_17
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_17
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_17
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019556_17
TS23: dorsal grey horn Weak Regionally restricted euxassay_019556_17
Specimen euxassay_019556_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019556_18
TS23: liver lobe Strong Regionally restricted euxassay_019556_18
TS23: lung Strong Regionally restricted euxassay_019556_18
TS23: sublingual gland primordium Strong Regionally restricted euxassay_019556_18
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_18
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019556_18
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019556_18
Specimen euxassay_019556_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019556_19
TS23: liver lobe Strong Regionally restricted euxassay_019556_19
TS23: lung Strong Regionally restricted euxassay_019556_19
TS23: vibrissa Strong Regionally restricted euxassay_019556_19
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_019556_19
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_019556_19
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_019556_19
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_019556_19
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_019556_19
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_019556_19
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_19
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019556_19
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_019556_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019556_19
Specimen euxassay_019556_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019556_20
TS23: liver lobe Strong Regionally restricted euxassay_019556_20
TS23: lung Strong Regionally restricted euxassay_019556_20
TS23: vibrissa Strong Regionally restricted euxassay_019556_20
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_019556_20
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_019556_20
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_019556_20
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_019556_20
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_019556_20
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019556_20
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019556_20
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_019556_20
Specimen euxassay_019556_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_21
TS23: lung Strong Regionally restricted euxassay_019556_21
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_019556_21
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_019556_21
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019556_21
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019556_21
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_019556_21
Specimen euxassay_019556_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_22
TS23: lung Strong Regionally restricted euxassay_019556_22
TS23: vibrissa Moderate Regionally restricted euxassay_019556_22
TS23: orbito-sphenoid Strong Regionally restricted euxassay_019556_22
TS23: telencephalon ventricular layer Strong Uniform euxassay_019556_22
Specimen euxassay_019556_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_019556_23
TS23: lung Strong Regionally restricted euxassay_019556_23
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory