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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828532
Gene symbol: Stxbp6
Gene name: syntaxin binding protein 6 (amisyn)
Probe: MGC clone 30948
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006760_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_01
TS23: fibula Weak Regionally restricted euxassay_006760_01
TS23: tibia Weak Regionally restricted euxassay_006760_01
Specimen euxassay_006760_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_02
TS23: fibula Weak Regionally restricted euxassay_006760_02
TS23: tibia Weak Regionally restricted euxassay_006760_02
Specimen euxassay_006760_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_03
TS23: fibula Weak Regionally restricted euxassay_006760_03
TS23: tibia Weak Regionally restricted euxassay_006760_03
TS23: femur Moderate Regionally restricted euxassay_006760_03
Specimen euxassay_006760_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_04
TS23: femur Moderate Regionally restricted euxassay_006760_04
TS23: fibula Weak Regionally restricted euxassay_006760_04
TS23: tibia Weak Regionally restricted euxassay_006760_04
Specimen euxassay_006760_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_05
TS23: telencephalon mantle layer Moderate Spotted euxassay_006760_05
TS23: fibula Weak Regionally restricted euxassay_006760_05
TS23: tibia Weak Regionally restricted euxassay_006760_05
TS23: femur Weak Regionally restricted euxassay_006760_05
Specimen euxassay_006760_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_06
TS23: telencephalon mantle layer Moderate Spotted euxassay_006760_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_06
TS23: femur Weak Regionally restricted euxassay_006760_06
TS23: fibula Weak Regionally restricted euxassay_006760_06
TS23: tibia Weak Regionally restricted euxassay_006760_06
TS23: hindlimb digit 1 Weak Regionally restricted euxassay_006760_06
TS23: hindlimb digit 2 Weak Regionally restricted euxassay_006760_06
TS23: hindlimb digit 3 Weak Regionally restricted euxassay_006760_06
TS23: hindlimb digit 4 Weak Regionally restricted euxassay_006760_06
TS23: hindlimb digit 5 Weak Regionally restricted euxassay_006760_06
Specimen euxassay_006760_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_07
TS23: telencephalon mantle layer Moderate Spotted euxassay_006760_07
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_07
TS23: hindlimb digit 1 Moderate Regionally restricted euxassay_006760_07
TS23: hindlimb digit 2 Moderate Regionally restricted euxassay_006760_07
TS23: hindlimb digit 3 Moderate Regionally restricted euxassay_006760_07
TS23: hindlimb digit 4 Moderate Regionally restricted euxassay_006760_07
TS23: hindlimb digit 5 Moderate Regionally restricted euxassay_006760_07
TS23: femur Weak Regionally restricted euxassay_006760_07
TS23: fibula Weak Regionally restricted euxassay_006760_07
TS23: tibia Weak Regionally restricted euxassay_006760_07
Specimen euxassay_006760_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_08
TS23: telencephalon mantle layer Moderate Spotted euxassay_006760_08
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_08
TS23: hindlimb digit 1 Moderate Regionally restricted euxassay_006760_08
TS23: hindlimb digit 2 Moderate Regionally restricted euxassay_006760_08
TS23: hindlimb digit 3 Moderate Regionally restricted euxassay_006760_08
TS23: hindlimb digit 4 Moderate Regionally restricted euxassay_006760_08
TS23: hindlimb digit 5 Moderate Regionally restricted euxassay_006760_08
TS23: femur Moderate Regionally restricted euxassay_006760_08
Specimen euxassay_006760_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_09
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_09
TS23: renal cortex Moderate Regionally restricted euxassay_006760_09
TS23: vibrissa Moderate Regionally restricted euxassay_006760_09
TS23: femur Moderate Regionally restricted euxassay_006760_09
TS23: hindlimb digit 1 Moderate Regionally restricted euxassay_006760_09
TS23: hindlimb digit 2 Moderate Regionally restricted euxassay_006760_09
TS23: hindlimb digit 3 Moderate Regionally restricted euxassay_006760_09
TS23: hindlimb digit 4 Moderate Regionally restricted euxassay_006760_09
TS23: hindlimb digit 5 Moderate Regionally restricted euxassay_006760_09
Specimen euxassay_006760_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_10
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_10
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006760_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_10
TS23: renal cortex Moderate Regionally restricted euxassay_006760_10
TS23: vibrissa Weak Regionally restricted euxassay_006760_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_10
Specimen euxassay_006760_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_11
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_11
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006760_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006760_11
TS23: renal cortex Moderate Regionally restricted euxassay_006760_11
TS23: vibrissa Moderate Regionally restricted euxassay_006760_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_11
TS23: femur Moderate Regionally restricted euxassay_006760_11
Specimen euxassay_006760_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_12
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_12
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006760_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006760_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006760_12
TS23: renal cortex Moderate Regionally restricted euxassay_006760_12
TS23: vibrissa Weak Regionally restricted euxassay_006760_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_12
TS23: femur Moderate Regionally restricted euxassay_006760_12
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_12
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006760_12
Specimen euxassay_006760_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006760_13
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_006760_13
TS23: pons ventricular layer Strong Regionally restricted euxassay_006760_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006760_13
TS23: renal cortex Strong Regionally restricted euxassay_006760_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_13
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_13
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006760_13
Specimen euxassay_006760_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006760_14
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_006760_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_14
TS23: pons ventricular layer Strong Regionally restricted euxassay_006760_14
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006760_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_006760_14
TS23: renal cortex Moderate Regionally restricted euxassay_006760_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_14
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_14
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006760_14
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006760_14
Specimen euxassay_006760_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_15
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006760_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_15
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006760_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_15
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_15
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006760_15
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006760_15
TS23: esophagus Moderate Regionally restricted euxassay_006760_15
Specimen euxassay_006760_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_16
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006760_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_16
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006760_16
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006760_16
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_16
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006760_16
Specimen euxassay_006760_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_17
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_17
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006760_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_17
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006760_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_17
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_17
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006760_17
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006760_17
TS23: rectum Moderate Regionally restricted euxassay_006760_17
Specimen euxassay_006760_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_18
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_18
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006760_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_18
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_006760_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_18
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006760_18
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_18
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006760_18
Specimen euxassay_006760_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_19
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_19
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_006760_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_19
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006760_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006760_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_19
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006760_19
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_19
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006760_19
Specimen euxassay_006760_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_20
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_006760_20
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_20
TS23: renal cortex Moderate Regionally restricted euxassay_006760_20
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_20
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_20
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_006760_20
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006760_20
Specimen euxassay_006760_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_21
TS23: telencephalon mantle layer Moderate Spotted euxassay_006760_21
TS23: pons mantle layer Moderate Regionally restricted euxassay_006760_21
TS23: renal cortex Strong Regionally restricted euxassay_006760_21
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_21
TS23: femur Moderate Regionally restricted euxassay_006760_21
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_006760_21
Specimen euxassay_006760_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_22
TS23: telencephalon mantle layer Moderate Spotted euxassay_006760_22
TS23: renal cortex Moderate Regionally restricted euxassay_006760_22
TS23: vibrissa Moderate Regionally restricted euxassay_006760_22
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006760_22
TS23: femur Moderate Regionally restricted euxassay_006760_22
TS23: hindlimb digit 1 Moderate Regionally restricted euxassay_006760_22
TS23: hindlimb digit 2 Moderate Regionally restricted euxassay_006760_22
TS23: hindlimb digit 3 Moderate Regionally restricted euxassay_006760_22
TS23: hindlimb digit 4 Moderate Regionally restricted euxassay_006760_22
TS23: hindlimb digit 5 Moderate Regionally restricted euxassay_006760_22
Specimen euxassay_006760_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_23
TS23: telencephalon mantle layer Moderate Spotted euxassay_006760_23
TS23: renal cortex Moderate Regionally restricted euxassay_006760_23
TS23: vibrissa Moderate Regionally restricted euxassay_006760_23
TS23: femur Moderate Regionally restricted euxassay_006760_23
Specimen euxassay_006760_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_006760_24
TS23: telencephalon mantle layer Moderate Spotted euxassay_006760_24
TS23: renal cortex Moderate Regionally restricted euxassay_006760_24
TS23: vibrissa Moderate Regionally restricted euxassay_006760_24
TS23: hindlimb digit 1 Moderate Regionally restricted euxassay_006760_24
TS23: hindlimb digit 2 Moderate Regionally restricted euxassay_006760_24
TS23: hindlimb digit 3 Moderate Regionally restricted euxassay_006760_24
TS23: hindlimb digit 4 Moderate Regionally restricted euxassay_006760_24
TS23: hindlimb digit 5 Moderate Regionally restricted euxassay_006760_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory