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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828466
Gene symbol: St6galnac5
Gene name: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Probe: IMAGE clone 851226
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000951_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_01
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_01
Specimen euxassay_000951_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_02
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_02
Specimen euxassay_000951_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_03
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_03
TS23: cerebellum intraventricular portion ventricular layer Moderate Regionally restricted euxassay_000951_03
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_03
Specimen euxassay_000951_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_04
TS23: cerebellum intraventricular portion ventricular layer Weak Regionally restricted euxassay_000951_04
TS23: cerebellum intraventricular portion mantle layer Weak Regionally restricted euxassay_000951_04
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_04
TS23: facial ganglion Moderate Uniform euxassay_000951_04
Specimen euxassay_000951_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_05
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000951_05
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_05
TS23: cerebellum intraventricular portion ventricular layer Moderate Spotted euxassay_000951_05
TS23: cerebellum intraventricular portion mantle layer Moderate Spotted euxassay_000951_05
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_05
TS23: facial ganglion Moderate Uniform euxassay_000951_05
Specimen euxassay_000951_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_000951_06
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_06
TS23: corpus striatum Weak Regionally restricted euxassay_000951_06
TS23: cerebellum intraventricular portion ventricular layer Weak Regionally restricted euxassay_000951_06
TS23: cerebellum intraventricular portion mantle layer Weak Regionally restricted euxassay_000951_06
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_06
TS23: facial ganglion Moderate Uniform euxassay_000951_06
TS23: superior glossopharyngeal ganglion Weak Regionally restricted euxassay_000951_06
TS23: inferior glossopharyngeal ganglion Weak Regionally restricted euxassay_000951_06
Specimen euxassay_000951_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_07
TS23: corpus striatum Weak Regionally restricted euxassay_000951_07
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000951_07 trigeminal motor nucleus
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_07
TS23: facial ganglion Moderate Uniform euxassay_000951_07
TS23: superior glossopharyngeal ganglion Weak Regionally restricted euxassay_000951_07
TS23: inferior glossopharyngeal ganglion Weak Regionally restricted euxassay_000951_07
Specimen euxassay_000951_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: corpus striatum Weak Regionally restricted euxassay_000951_08
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_000951_08
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000951_08 facial motor nucleus
TS23: superior vagus ganglion Weak Regionally restricted euxassay_000951_08
Specimen euxassay_000951_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: corpus striatum Weak Regionally restricted euxassay_000951_09
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_000951_09
TS23: cerebellum intraventricular portion mantle layer Moderate Spotted euxassay_000951_09
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000951_09 facial motor nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_000951_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_000951_09
TS23: inferior vagus ganglion Weak Regionally restricted euxassay_000951_09
TS23: superior vagus ganglion Weak Regionally restricted euxassay_000951_09
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_09
Specimen euxassay_000951_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: corpus striatum Weak Regionally restricted euxassay_000951_10
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_000951_10
TS23: cerebellum intraventricular portion ventricular layer Weak Spotted euxassay_000951_10
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000951_10 facial motor nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_000951_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_000951_10
TS23: superior vagus ganglion Weak Regionally restricted euxassay_000951_10
Specimen euxassay_000951_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_11
TS23: corpus striatum Moderate Regionally restricted euxassay_000951_11
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_11
TS23: cerebellum intraventricular portion ventricular layer Moderate Spotted euxassay_000951_11
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000951_11 inferior olivary nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_000951_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_000951_11
Specimen euxassay_000951_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: corpus striatum Moderate Regionally restricted euxassay_000951_12
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_12
TS23: medulla oblongata basal plate Weak Uniform euxassay_000951_12 inferior olivary nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_000951_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_000951_12
Specimen euxassay_000951_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: corpus striatum Moderate Regionally restricted euxassay_000951_13
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_000951_13
Specimen euxassay_000951_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_14
TS23: cerebellum intraventricular portion ventricular layer Weak Spotted euxassay_000951_14
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000951_14 inferior olivary nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_000951_14
Specimen euxassay_000951_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_15
TS23: corpus striatum Moderate Regionally restricted euxassay_000951_15
TS23: ventral grey horn Weak Regionally restricted euxassay_000951_15
Specimen euxassay_000951_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_16
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_000951_16
TS23: corpus striatum Moderate Regionally restricted euxassay_000951_16
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_16
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000951_16 facial motor nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_000951_16
Specimen euxassay_000951_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_000951_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_17
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_17
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000951_17 facial motor nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_000951_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000951_17
Specimen euxassay_000951_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_18
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_000951_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_18
TS23: medulla oblongata basal plate Moderate Uniform euxassay_000951_18 trigeminal motor nucleus
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000951_18
TS23: trigeminal ganglion Weak Uniform euxassay_000951_18
TS23: inferior vagus ganglion Weak Regionally restricted euxassay_000951_18
TS23: superior vagus ganglion Weak Regionally restricted euxassay_000951_18
Specimen euxassay_000951_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_19
TS23: corpus striatum Moderate Regionally restricted euxassay_000951_19
TS23: cerebellum intraventricular portion mantle layer Weak Spotted euxassay_000951_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_000951_19
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_19
TS23: inferior glossopharyngeal ganglion Weak Regionally restricted euxassay_000951_19
TS23: superior glossopharyngeal ganglion Weak Regionally restricted euxassay_000951_19
Specimen euxassay_000951_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: corpus striatum Moderate Regionally restricted euxassay_000951_20
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_20
TS23: cerebellum intraventricular portion ventricular layer Weak Spotted euxassay_000951_20
TS23: cerebellum intraventricular portion mantle layer Weak Spotted euxassay_000951_20
TS23: dorsal root ganglion Weak Regionally restricted euxassay_000951_20
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_20
TS23: facial ganglion Moderate Uniform euxassay_000951_20
Specimen euxassay_000951_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_21
TS23: corpus striatum Moderate Regionally restricted euxassay_000951_21
TS23: cerebellum intraventricular portion ventricular layer Moderate Spotted euxassay_000951_21
TS23: cerebellum intraventricular portion mantle layer Moderate Spotted euxassay_000951_21
TS23: facial ganglion Moderate Uniform euxassay_000951_21
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_21
Specimen euxassay_000951_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_22
TS23: corpus striatum Moderate Regionally restricted euxassay_000951_22
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_22
TS23: cerebellum intraventricular portion ventricular layer Moderate Spotted euxassay_000951_22
TS23: facial ganglion Moderate Uniform euxassay_000951_22
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_22
Specimen euxassay_000951_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Uniform euxassay_000951_23
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_23
Specimen euxassay_000951_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000951_24
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_000951_24
TS23: trigeminal ganglion Moderate Uniform euxassay_000951_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory