About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828465
Gene symbol: St6galnac5
Gene name: ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Probe: IMAGE clone 851226
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002840_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_002840_01
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_002840_01
Specimen euxassay_002840_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_002840_02
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_002840_02
Specimen euxassay_002840_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_002840_03
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_002840_03
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_002840_03
Specimen euxassay_002840_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_04
TS23: facial ganglion Moderate Regionally restricted euxassay_002840_04
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_002840_04
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_002840_04
Specimen euxassay_002840_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_05
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_002840_05
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_002840_05
Specimen euxassay_002840_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_06
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_002840_06
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_002840_06
Specimen euxassay_002840_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_002840_07
TS23: metencephalon basal plate Moderate Regionally restricted euxassay_002840_07 trigeminal motor nucleus
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_07
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_002840_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_07
Specimen euxassay_002840_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_002840_08
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002840_08 facial motor nucleus
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_08
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002840_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_08
Specimen euxassay_002840_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_09
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002840_09 facial motor nucleus
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002840_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_09
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_09
Specimen euxassay_002840_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002840_10 facial motor nucleus
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002840_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_10
Specimen euxassay_002840_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_002840_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002840_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_11
Specimen euxassay_002840_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_12
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_002840_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002840_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_12
Specimen euxassay_002840_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_13
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_002840_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_13
Specimen euxassay_002840_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002840_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_14
Specimen euxassay_002840_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_002840_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_15
Specimen euxassay_002840_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002840_16 facial motor nucleus
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_002840_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_002840_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_16
Specimen euxassay_002840_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002840_17 facial motor nucleus
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_17
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_002840_17
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_17
Specimen euxassay_002840_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_18
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_002840_18 trigeminal motor nucleus
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_18
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_002840_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_18
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_18
Specimen euxassay_002840_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_002840_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_19
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_19
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_002840_19
TS23: ventral grey horn Moderate Regionally restricted euxassay_002840_19
Specimen euxassay_002840_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_20
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002840_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_20
Specimen euxassay_002840_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_002840_21
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002840_21
Specimen euxassay_002840_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_22
TS23: facial ganglion Moderate Regionally restricted euxassay_002840_22
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_22
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_002840_22
Specimen euxassay_002840_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_002840_23
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_002840_23
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002840_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory