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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828383
Gene symbol: Sorl1
Gene name: sortilin-related receptor, LDLR class A repeats-containing
Probe: T37070
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012191_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_01
Specimen euxassay_012191_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_02
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_02
TS23: stomach Moderate Regionally restricted euxassay_012191_02
Specimen euxassay_012191_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_03
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_03
TS23: left lung Strong Regionally restricted euxassay_012191_03
TS23: stomach Moderate Regionally restricted euxassay_012191_03
Specimen euxassay_012191_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_04
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_04
TS23: left lung Moderate Regionally restricted euxassay_012191_04
TS23: stomach Moderate Regionally restricted euxassay_012191_04
Specimen euxassay_012191_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_05
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_05
TS23: left lung Moderate Regionally restricted euxassay_012191_05
TS23: renal calyx Moderate Regionally restricted euxassay_012191_05
TS23: stomach Moderate Regionally restricted euxassay_012191_05
Specimen euxassay_012191_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_06
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_06
TS23: left lung Moderate Regionally restricted euxassay_012191_06
TS23: renal calyx Moderate Regionally restricted euxassay_012191_06
TS23: stomach Moderate Regionally restricted euxassay_012191_06
Specimen euxassay_012191_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_07
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_07
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_07
TS23: left lung Moderate Regionally restricted euxassay_012191_07
TS23: renal calyx Moderate Regionally restricted euxassay_012191_07
TS23: renal pelvis Moderate Regionally restricted euxassay_012191_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_07
TS23: stomach Moderate Regionally restricted euxassay_012191_07
Specimen euxassay_012191_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_08
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_012191_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_08
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_08
TS23: left lung Moderate Regionally restricted euxassay_012191_08
TS23: renal calyx Moderate Regionally restricted euxassay_012191_08
TS23: ureter Moderate Regionally restricted euxassay_012191_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_08
TS23: stomach Moderate Regionally restricted euxassay_012191_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_08
Specimen euxassay_012191_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012191_09
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012191_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_09
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_09
TS23: left lung Moderate Regionally restricted euxassay_012191_09
TS23: renal calyx Moderate Regionally restricted euxassay_012191_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_09
TS23: stomach Moderate Regionally restricted euxassay_012191_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_09
Specimen euxassay_012191_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012191_10
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012191_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012191_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_10
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_10
TS23: left lung Moderate Regionally restricted euxassay_012191_10
TS23: right lung Moderate Regionally restricted euxassay_012191_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_10
TS23: thyroid gland Moderate Regionally restricted euxassay_012191_10
TS23: stomach Moderate Regionally restricted euxassay_012191_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_10
Specimen euxassay_012191_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012191_11
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012191_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012191_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_11
TS23: right lung Moderate Regionally restricted euxassay_012191_11
TS23: ureter Moderate Regionally restricted euxassay_012191_11
TS23: thymus primordium Moderate Regionally restricted euxassay_012191_11
TS23: thyroid gland Moderate Regionally restricted euxassay_012191_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_11
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_012191_11
TS23: esophagus epithelium Moderate Regionally restricted euxassay_012191_11
Specimen euxassay_012191_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012191_12
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012191_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012191_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_12
TS23: right lung Moderate Regionally restricted euxassay_012191_12
TS23: bladder Moderate Regionally restricted euxassay_012191_12
TS23: thymus primordium Moderate Regionally restricted euxassay_012191_12
TS23: thyroid gland Moderate Regionally restricted euxassay_012191_12
TS23: midgut Moderate Regionally restricted euxassay_012191_12
TS23: esophagus epithelium Moderate Regionally restricted euxassay_012191_12
Specimen euxassay_012191_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_13
TS23: right lung Moderate Regionally restricted euxassay_012191_13
TS23: ureter Moderate Regionally restricted euxassay_012191_13
TS23: bladder Moderate Regionally restricted euxassay_012191_13
TS23: thymus primordium Moderate Regionally restricted euxassay_012191_13
TS23: rectum Moderate Regionally restricted euxassay_012191_13
TS23: midgut Moderate Regionally restricted euxassay_012191_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_13
TS23: trachea Moderate Regionally restricted euxassay_012191_13
TS23: esophagus epithelium Moderate Regionally restricted euxassay_012191_13
Specimen euxassay_012191_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012191_14
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012191_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012191_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_14
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_14
TS23: right lung Moderate Regionally restricted euxassay_012191_14
TS23: ureter Moderate Regionally restricted euxassay_012191_14
TS23: renal calyx Moderate Regionally restricted euxassay_012191_14
TS23: bladder Moderate Regionally restricted euxassay_012191_14
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_14
TS23: thymus primordium Moderate Regionally restricted euxassay_012191_14
TS23: thyroid gland Moderate Regionally restricted euxassay_012191_14
TS23: midgut Moderate Regionally restricted euxassay_012191_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_14
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_012191_14
Specimen euxassay_012191_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_012191_15
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_012191_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012191_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_15
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_15
TS23: right lung Moderate Regionally restricted euxassay_012191_15
TS23: renal calyx Moderate Regionally restricted euxassay_012191_15
TS23: ureter Moderate Regionally restricted euxassay_012191_15
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_15
TS23: thymus primordium Moderate Regionally restricted euxassay_012191_15
TS23: thyroid gland Moderate Regionally restricted euxassay_012191_15
TS23: midgut Moderate Regionally restricted euxassay_012191_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_15
Specimen euxassay_012191_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_16
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_012191_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_16
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_012191_16
TS23: right lung Moderate Regionally restricted euxassay_012191_16
TS23: renal calyx Moderate Regionally restricted euxassay_012191_16
TS23: renal pelvis Moderate Regionally restricted euxassay_012191_16
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_16
TS23: thyroid gland Moderate Regionally restricted euxassay_012191_16
TS23: midgut Moderate Regionally restricted euxassay_012191_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_16
Specimen euxassay_012191_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_17
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_012191_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012191_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_17
TS23: right lung Moderate Regionally restricted euxassay_012191_17
TS23: renal calyx Moderate Regionally restricted euxassay_012191_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_17
TS23: midgut Moderate Regionally restricted euxassay_012191_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_17
Specimen euxassay_012191_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_18
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_012191_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012191_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012191_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_18
TS23: right lung Moderate Regionally restricted euxassay_012191_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_18
TS23: midgut Moderate Regionally restricted euxassay_012191_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_012191_18
Specimen euxassay_012191_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_19
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_012191_19
TS23: right lung Moderate Regionally restricted euxassay_012191_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_012191_19
Specimen euxassay_012191_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_20
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_20
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_20
TS23: right lung Moderate Regionally restricted euxassay_012191_20
Specimen euxassay_012191_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_21
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_21
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_012191_21
TS23: right lung Moderate Regionally restricted euxassay_012191_21
Specimen euxassay_012191_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_22
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_22
TS23: right lung Moderate Regionally restricted euxassay_012191_22
Specimen euxassay_012191_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_23
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_23
Specimen euxassay_012191_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_012191_24
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_012191_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory