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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828368
Gene symbol: Snx31
Gene name: sorting nexin 31
Probe: IMAGE clone 2182357
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009174_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_01
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_01
TS23: foot Moderate Regionally restricted euxassay_009174_01
Specimen euxassay_009174_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_02
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_02
Specimen euxassay_009174_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_03
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_03
TS23: hand Moderate Regionally restricted euxassay_009174_03
Specimen euxassay_009174_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_04
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_04
TS23: conjunctival sac Strong Regionally restricted euxassay_009174_04
TS23: stomach Moderate Regionally restricted euxassay_009174_04
TS23: hand Moderate Regionally restricted euxassay_009174_04
Specimen euxassay_009174_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_05
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_05
TS23: conjunctival sac Strong Regionally restricted euxassay_009174_05
TS23: stomach Moderate Regionally restricted euxassay_009174_05
TS23: hand Moderate Regionally restricted euxassay_009174_05
Specimen euxassay_009174_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_06
TS23: stomach Moderate Regionally restricted euxassay_009174_06
TS23: hand Moderate Regionally restricted euxassay_009174_06
Specimen euxassay_009174_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_07
TS23: stomach Moderate Regionally restricted euxassay_009174_07
Specimen euxassay_009174_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_08
Specimen euxassay_009174_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_09
TS23: oral epithelium Strong Regionally restricted euxassay_009174_09
Specimen euxassay_009174_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_10
TS23: oral epithelium Strong Regionally restricted euxassay_009174_10
Specimen euxassay_009174_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_11
TS23: anterior naris Strong Regionally restricted euxassay_009174_11
TS23: oral epithelium Strong Regionally restricted euxassay_009174_11
Specimen euxassay_009174_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_12
TS23: anterior naris Strong Regionally restricted euxassay_009174_12
TS23: oral epithelium Strong Regionally restricted euxassay_009174_12
TS23: esophagus Moderate Regionally restricted euxassay_009174_12
Specimen euxassay_009174_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_13
TS23: anterior naris Strong Regionally restricted euxassay_009174_13
TS23: oral epithelium Strong Regionally restricted euxassay_009174_13
TS23: bladder Strong Regionally restricted euxassay_009174_13
TS23: urinary system Strong Regionally restricted euxassay_009174_13
TS23: urethra Present euxassay_009174_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: esophagus Moderate Regionally restricted euxassay_009174_13
Specimen euxassay_009174_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_14
TS23: oral epithelium Strong Regionally restricted euxassay_009174_14
TS23: bladder Strong Regionally restricted euxassay_009174_14
TS23: urinary system Strong Regionally restricted euxassay_009174_14
TS23: urethra Present euxassay_009174_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_009174_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_15
TS23: anterior naris Strong Regionally restricted euxassay_009174_15
TS23: oral epithelium Strong Regionally restricted euxassay_009174_15
TS23: bladder Strong Regionally restricted euxassay_009174_15
Specimen euxassay_009174_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_16
TS23: anterior naris Strong Regionally restricted euxassay_009174_16
TS23: oral epithelium Strong Regionally restricted euxassay_009174_16
Specimen euxassay_009174_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_17
Specimen euxassay_009174_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_18
Specimen euxassay_009174_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_19
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_19
Specimen euxassay_009174_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_20
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_20
Specimen euxassay_009174_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_21
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_21
Specimen euxassay_009174_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_22
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_22
TS23: conjunctival sac Strong Regionally restricted euxassay_009174_22
Specimen euxassay_009174_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_23
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_23
Specimen euxassay_009174_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009174_24
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009174_24
TS23: hand Moderate Regionally restricted euxassay_009174_24
TS23: foot Moderate Regionally restricted euxassay_009174_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory