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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828361
Gene symbol: Snurf
Gene name: SNRPN upstream reading frame
Probe: T38015
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014492_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_01
Specimen euxassay_014492_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_014492_02
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_02
Specimen euxassay_014492_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_03
TS23: neural retina Moderate Regionally restricted euxassay_014492_03
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_03
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_03
Specimen euxassay_014492_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_04
TS23: facial ganglion Strong Regionally restricted euxassay_014492_04
TS23: neural retina Moderate Regionally restricted euxassay_014492_04
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_04
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_04
Specimen euxassay_014492_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_05
TS23: facial ganglion Strong Regionally restricted euxassay_014492_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014492_05
TS23: midbrain mantle layer Strong Uniform euxassay_014492_05
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_05
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_05
Specimen euxassay_014492_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014492_06
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_014492_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014492_06
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_06
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_06
TS23: pons mantle layer Strong Uniform euxassay_014492_06
TS23: midbrain marginal layer Strong Uniform euxassay_014492_06
TS23: ventral grey horn Strong Uniform euxassay_014492_06
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_06
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_014492_06
Specimen euxassay_014492_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_014492_07
TS23: vagus ganglion Strong Regionally restricted euxassay_014492_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014492_07
TS23: midbrain mantle layer Strong Uniform euxassay_014492_07
TS23: pons mantle layer Strong Uniform euxassay_014492_07
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_07
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_07
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_07
TS23: ventral grey horn Strong Uniform euxassay_014492_07
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_014492_07
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_07
Specimen euxassay_014492_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_014492_08
TS23: midbrain mantle layer Strong Uniform euxassay_014492_08
TS23: pons mantle layer Strong Uniform euxassay_014492_08
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_08
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_08
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_08
TS23: ventral grey horn Strong Uniform euxassay_014492_08
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_014492_08
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_08
TS23: cervical ganglion Weak Regionally restricted euxassay_014492_08
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_014492_08
Specimen euxassay_014492_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_014492_09
TS23: midbrain mantle layer Strong Uniform euxassay_014492_09
TS23: pons mantle layer Strong Uniform euxassay_014492_09
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_09
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_09
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_09
TS23: ventral grey horn Strong Uniform euxassay_014492_09
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_014492_09
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_09
TS23: thoracic ganglion Weak Regionally restricted euxassay_014492_09
Specimen euxassay_014492_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Uniform euxassay_014492_10
TS23: pons mantle layer Strong Uniform euxassay_014492_10
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_10
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_10
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_10
TS23: ventral grey horn Strong Uniform euxassay_014492_10
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_10
TS23: thoracic ganglion Weak Regionally restricted euxassay_014492_10
Specimen euxassay_014492_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014492_11
TS23: midbrain mantle layer Strong Uniform euxassay_014492_11
TS23: pons mantle layer Strong Uniform euxassay_014492_11
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_11
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_11
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_11
TS23: ventral grey horn Strong Uniform euxassay_014492_11
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_11
Specimen euxassay_014492_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014492_12
TS23: midbrain mantle layer Strong Uniform euxassay_014492_12
TS23: pons mantle layer Strong Uniform euxassay_014492_12
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_12
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_12
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_12
TS23: ventral grey horn Strong Uniform euxassay_014492_12
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_12
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_014492_12
Specimen euxassay_014492_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014492_13
TS23: midbrain mantle layer Strong Uniform euxassay_014492_13
TS23: pons mantle layer Strong Uniform euxassay_014492_13
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_13
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_13
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_13
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_014492_13
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_13
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_014492_13
Specimen euxassay_014492_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014492_14
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_14
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_14
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_14
TS23: pons mantle layer Strong Uniform euxassay_014492_14
TS23: midbrain mantle layer Strong Uniform euxassay_014492_14
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_014492_14
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_14
TS23: cervical ganglion Weak Regionally restricted euxassay_014492_14
Specimen euxassay_014492_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_014492_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014492_15
TS23: midbrain mantle layer Strong Uniform euxassay_014492_15
TS23: pons mantle layer Strong Uniform euxassay_014492_15
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_15
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_15
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_15
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_014492_15
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_014492_15
Specimen euxassay_014492_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_16
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_014492_16
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014492_16
TS23: midbrain mantle layer Strong Uniform euxassay_014492_16
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_16
TS23: pons mantle layer Strong Uniform euxassay_014492_16
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_16
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_014492_16
Specimen euxassay_014492_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_17
TS23: facial ganglion Strong Regionally restricted euxassay_014492_17
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_17
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_17
TS23: midbrain mantle layer Strong Uniform euxassay_014492_17
Specimen euxassay_014492_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_18
TS23: facial ganglion Strong Regionally restricted euxassay_014492_18
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_18
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_18
Specimen euxassay_014492_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_19
TS23: facial ganglion Strong Regionally restricted euxassay_014492_19
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_19
TS23: rest of cerebellum mantle layer Strong Uniform euxassay_014492_19
Specimen euxassay_014492_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014492_20
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_20
Specimen euxassay_014492_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_014492_21
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_21
Specimen euxassay_014492_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_014492_22
TS23: telencephalon mantle layer Strong Uniform euxassay_014492_22
Specimen euxassay_014492_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_014492_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory